The era of reference genomes in conservation genomics

被引：143

作者：

Formenti, Giulio ^{[1
]}

Theissinger, Kathrin ^{[2
,3
,4
]}

Fernandes, Carlos ^{[5
,6
]}

Bista, Iliana ^{[7
,8
]}

Bombarely, Aureliano ^{[9
]}

Bleidorn, Christoph ^{[10
]}

Ciofi, Claudio ^{[11
]}

Crottini, Angelica ^{[12
]}

Godoy, Jose A. ^{[13
]}

Hoglund, Jacob ^{[14
]}

Malukiewicz, Joanna ^{[15
]}

Mouton, Alice ^{[16
]}

Oomen, Rebekah A. ^{[17
,18
]}

Paez, Sadye ^{[1
]}

Palsboll, Per J. ^{[19
,20
]}

Pampoulie, Christophe ^{[21
]}

Ruiz-Lopez, Maria J. ^{[13
]}

Svardal, Hannes ^{[22
]}

Theofanopoulou, Constantina ^{[1
]}

de Vries, Jan ^{[23
]}

Waldvogel, Ann-Marie ^{[24
]}

Zhang, Guojie ^{[25
,26
]}

Mazzoni, Camila J. ^{[27
]}

Jarvis, Erich D. ^{[1
]}

Balint, Miklos ^{[2
,4
,28
]}

机构：

[1] Rockefeller Univ, 1230 York Ave, New York, NY 10065 USA

[2] LOEWE Ctr Translat Biodivers Genom LOEWE TBG, Georg Voigt Str 14-16, D-60325 Frankfurt, Germany

[3] Univ Koblenz Landau, Inst Environm Sci, Fortstr 7, D-76829 Landau, Germany

[4] Senckenberg Biodivers & Climate Res Ctr, Georg Voigt Str 14-16, D-60325 Frankfurt, Germany

[5] Univ Lisbon, Fac Ciencias, CE3C Ctr Ecol Evolut & Environm Changes, Dept Biol Anim, P-1749016 Lisbon, Portugal

[6] Univ Lisbon, Fac Psicol, Alameda Univ, P-1649013 Lisbon, Portugal

[7] Univ Cambridge, Dept Genet, Cambridge CB2 3EH, England

[8] Wellcome Sanger Inst, Hinxton, England

[9] Univ Milan, Via Celoria 26, I-20133 Milan, Italy

[10] Univ Gottingen, Dept Anim Evolut & Biodivers, Untere Karspule 2, D-37073 Gottingen, Germany

[11] Univ Florence, Dept Biol, Via Madonna del Piano 6, I-50019 Sesto Fiorentino, FI, Italy

[12] Ctr Invest Biodiversidade & Recursos Genet, CIBIO InBio, Rua Padre Armando Quintas 7, P-4485661 Vairao, Portugal

[13] CSIC, Estn Biol Donana, Av Americo Vespucio 26, Seville 41092, Spain

[14] Uppsala Univ, Dept Ecol & Genet, Norbyvagen 18D, S-75246 Uppsala, Sweden

[15] German Primate Ctr, Kellnerweg 4, D-37077 Gottingen, Germany

[16] Univ Liege, InBios Conservat Genet Lab, Chemin Vallee 4, B-4000 Liege, Belgium

[17] Univ Oslo, Ctr Ecol & Evolutionary Synth, Blindernveien 31, N-0371 Oslo, Norway

[18] Univ Agder, Ctr Coastal Res, Gimlemoen 25j, N-4630 Kristiansand, Norway

[19] Univ Groningen Nijenborgh, Groningen Inst Evolutionary Life Sci, NL-9747 AG Groningen, Netherlands

[20] Ctr Coastal Studies, 5 Holway Ave, Provincetown, MA 02657 USA

[21] Marine & Freshwater Res Inst, Fornubudir 5, IS-220 Hanafjordur, Iceland

[22] Univ Antwerp, Dept Biol, Groenenborgerlaan 171, B-2020 Antwerp, Belgium

[23] Univ Gottingen, Goettingen Ctr Mol Biosci GZMB, Inst Microbiol & Genet, Dept Appl Bioinformat,Campus Inst Data Sci CIDAS, Goldschmidtstr 1, D-37077 Gottingen, Germany

[24] Univ Cologne, Inst Zool, Zulpicherstr 47b, D-50674 Cologne, Germany

[25] Univ Copenhagen, Villum Ctr Biodivers Genom, Dept Biol, Sect Ecol & Evolut, Build 3,Univ Pk 15, DK-2100 Copenhagen, Denmark

[26] BGI Shenzhen, China Natl Genebank, Jinsha Rd, Shenzhen 518083, Peoples R China

[27] Leibniz Inst Zoo & Wildlife Res IZW, Alfred Kowalke Str 17, D-10315 Berlin, Germany

[28] Justus Liebig Univ Giessen, Inst Insect Biotechnol, Heinrich Buff Ring 26-32, D-35392 Giessen, Germany

来源：

TRENDS IN ECOLOGY & EVOLUTION | 2022年 / 37卷 / 03期

关键词：

D O I：

10.1016/j.tree.2021.11.008

中图分类号：

Q14 [生态学（生物生态学）];

学科分类号：

071012 ; 0713 ;

摘要：

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics.

引用

页码：197 / 202

页数：6

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