Comparative Mitochondrial Genome Analysis of Eligma narcissus and other Lepidopteran Insects Reveals Conserved Mitochondrial Genome Organization and Phylogenetic Relationships

被引:23
|
作者
Dai, Li-Shang [1 ]
Zhu, Bao-Jian [1 ]
Zhao, Yue [1 ]
Zhang, Cong-Fen [1 ]
Liu, Chao-Liang [1 ]
机构
[1] Anhui Agr Univ, Coll Life Sci, 130 Changjiang West Rd, Hefei 230036, Peoples R China
来源
SCIENTIFIC REPORTS | 2016年 / 6卷
关键词
SILKWORM MOTH; DNA SEQUENCE; CRUSTACEA; PROGRAM;
D O I
10.1038/srep26387
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In this study, we sequenced the complete mitochondrial genome of Eligma narcissus and compared it with 18 other lepidopteran species. The mitochondrial genome (mitogenome) was a circular molecule of 15,376 bp containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and an adenine (A) + thymine (T)-rich region. The positive AT skew (0.007) indicated the occurrence of more As than Ts. The arrangement of 13 PCGs was similar to that of other sequenced lepidopterans. All PCGs were initiated by ATN codons, except for the cytochrome c oxidase subunit 1 (cox1) gene, which was initiated by the CGA sequence, as observed in other lepidopterans. The results of the codon usage analysis indicated that Asn, Ile, Leu, Tyr and Phe were the five most frequent amino acids. All tRNA genes were shown to be folded into the expected typical cloverleaf structure observed for mitochondrial tRNA genes. Phylogenetic relationships were analyzed based on the nucleotide sequences of 13 PCGs from other insect mitogenomes, which confirmed that E. narcissus is a member of the Noctuidae superfamily.
引用
收藏
页数:11
相关论文
共 50 条
  • [41] Mitochondrial genome of Argopecten irradians reveals higher-level phylogenetic relationships in Anisomyaria
    Xin, Zhao-Zhe
    Liu, Yu
    Li, Chao-Feng
    Zhang, Dai-Zhen
    Jiang, Sen-Hao
    Zhang, Hua-Bin
    Zhou, Chun -Lin
    Tang, Bo -Ping
    Liu, Qiu-Ning
    Dai, Li -Shang
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2018, 117 : 1089 - 1092
  • [42] The mitochondrial genome of the spinyhead croaker Collichthys lucida: Genome organization and phylogenetic consideration
    Cheng, Yuanzhi
    Wang, Rixin
    Xu, Tianjun
    MARINE GENOMICS, 2011, 4 (01) : 17 - 23
  • [43] Comparative mitogenomic analysis of species in the subfamily Amphinemurinae (Plecoptera: Nemouridae) reveal conserved mitochondrial genome organization
    Cao, Jin-Jun
    Wang, Ying
    Li, Wei-Hai
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2019, 138 : 292 - 301
  • [44] Comparative mitochondrial genome analysis of Cynoglossidae (Teleost: Pleuronectiformes) and phylogenetic implications
    Hu, Bilin
    Jiang, Tingqi
    Wei, Liming
    Zhang, Nannan
    Wang, Kaixin
    Liu, Liqin
    Liu, Bingjian
    Liu, Jing
    Lu, Zhenming
    Gong, Li
    ACTA OCEANOLOGICA SINICA, 2023, 42 (11) : 69 - 80
  • [45] Comparative mitochondrial genome analysis of Cynoglossidae (Teleost: Pleuronectiformes) and phylogenetic implications
    Bilin Hu
    Tingqi Jiang
    Liming Wei
    Nannan Zhang
    Kaixin Wang
    Liqin Liu
    Bingjian Liu
    Jing Liu
    Zhenming Lü
    Li Gong
    Acta Oceanologica Sinica, 2023, 42 (11) : 69 - 80
  • [46] Comparative mitochondrial genome analysis of Cynoglossidae (Teleost: Pleuronectiformes) and phylogenetic implications
    Bilin Hu
    Tingqi Jiang
    Liming Wei
    Nannan Zhang
    Kaixin Wang
    Liqin Liu
    Bingjian Liu
    Jing Liu
    Zhenming Lü
    Li Gong
    Acta Oceanologica Sinica, 2023, 42 : 69 - 80
  • [47] Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum
    Yang, Meixin
    Zhang, Hao
    van der Lee, Theo A. J.
    Waalwijk, Cees
    van Diepeningen, Anne D.
    Feng, Jie
    Brankovics, Balazs
    Chen, Wanquan
    FRONTIERS IN MICROBIOLOGY, 2020, 11
  • [48] Author Correction: Characterization of the Complete Mitochondrial Genome of Leucoma salicis (Lepidoptera: Lymantriidae) and Comparison with Other Lepidopteran Insects
    Yu-Xuan Sun
    Lei Wang
    Guo-Qing Wei
    Cen Qian
    Li-Shang Dai
    Yu Sun
    Muhammad Nadeem Abbas
    Bao-Jian Zhu
    Chao-Liang Liu
    Scientific Reports, 10
  • [49] Mitochondrial genome of Cricetulus migratorius (Rodentia: Cricetidae): Insights into the characteristics of the mitochondrial genome and the phylogenetic relationships of Cricetulus species
    Ding, Li
    Li, Wenjia
    Liao, Jicheng
    GENE, 2016, 595 (01) : 121 - 129
  • [50] The mitochondrial genome and phylogenetic analysis of Rhacophorus rhodopus
    Wei Chen
    Haifen Qin
    Zhenkun Zhao
    Jiahong Liao
    Hongzhou Chen
    Lichun Jiang
    Buddhi Dayananda
    Scientific Reports, 12