Complete chloroplast genome sequence of Hopea chinensis (Dipterocarpaceae), a rare and critically endangered species

被引:2
|
作者
Shi, Yancai [1 ,2 ]
Duan, Na [1 ]
Liu, Bingbing [1 ]
机构
[1] Shanxi Univ, Inst Loess Plateau, Taiyuan 030006, Shanxi, Peoples R China
[2] Guangxi Zhuang Autonomous Reg & Chinese Acad Sci, Guangxi Inst Bot, Guilin, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Hopea; chloroplast genome; phylogenetic analysis;
D O I
10.1080/23802359.2019.1681920
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Hopea chinensis (Dipterocarpaceae) is a rare and critically endangered species. Here, we first report and characterize its complete chloroplast genome sequence based on Illumina paired-end sequencing data. The complete plastid genome was 152,054 bp, which contained inverted repeats (IR) of 21,702 bp separated by a large single-copy (LSC) and a small single-copy (SSC) of 20,462 bp and 88,188 bp, respectively. The cpDNA contains 129 genes, comprising 83 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the plastome is 37.4%. The phylogenetic analysis of 18 selected chloroplast genomes demonstrated that H. chinensis was close to the species Parashorea macrophylla.
引用
收藏
页码:4079 / 4080
页数:2
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