Untimely TGFβ responses in COVID-19 limit antiviral functions of NK cells

被引:163
|
作者
Witkowski, Mario [1 ,2 ,3 ,4 ,5 ]
Tizian, Caroline [1 ,2 ,3 ,4 ]
Ferreira-Gomes, Marta [6 ]
Niemeyer, Daniela [7 ,8 ,9 ,10 ]
Jones, Terry C. [7 ,8 ,9 ,10 ,11 ]
Heinrich, Frederik [6 ]
Frischbutter, Stefan [8 ,9 ,12 ,13 ]
Angermair, Stefan [2 ,3 ,14 ]
Hohnstein, Thordis [1 ,2 ,3 ,4 ]
Mattiola, Irene [1 ,2 ,3 ,4 ]
Nawrath, Philipp
McEwen, Sophie
Zocche, Silvia [15 ,16 ,17 ]
Viviano, Edoardo [18 ,19 ,20 ]
Heinz, Gitta Anne [6 ]
Maurer, Marcus [8 ,9 ,12 ,13 ]
Koelsch, Uwe [21 ]
Chua, Robert Lorenz [19 ,20 ,22 ,23 ]
Aschman, Tom [19 ,20 ,24 ]
Meisel, Christian [16 ,17 ,21 ,25 ]
Radke, Josefine [19 ,20 ,24 ]
Sawitzki, Birgit [16 ,17 ,25 ]
Roehmel, Jobst [19 ,20 ,26 ]
Allers, Kristina [2 ,3 ,27 ,28 ]
Moos, Verena [2 ,3 ,27 ,28 ]
Schneider, Thomas [2 ,3 ,27 ,28 ]
Hanitsch, Leif [16 ,17 ,25 ]
Mall, Marcus A. [19 ,20 ,26 ,29 ]
Conrad, Christian [19 ,20 ,22 ,23 ]
Radbruch, Helena [19 ,20 ,24 ]
Duerr, Claudia U. [2 ,3 ,30 ]
Trapani, Joseph A. [31 ]
Marcenaro, Emanuela [32 ]
Kallinich, Tilmann [19 ,20 ,26 ,33 ]
Corman, Victor M. [7 ,8 ,9 ,10 ]
Kurth, Florian [19 ,20 ,34 ,35 ,36 ]
Sander, Leif Erik [19 ,20 ,34 ]
Drosten, Christian [7 ,8 ,9 ,10 ]
Treskatsch, Sascha [2 ,3 ,14 ]
Durek, Pawel [6 ]
Kruglov, Andrey [37 ,38 ,39 ,40 ]
Radbruch, Andreas [41 ]
Mashreghi, Mir-Farzin [6 ,42 ]
Diefenbach, Andreas [1 ,2 ,3 ,4 ,5 ]
机构
[1] Charite Univ Med Berlin, Inst Microbiol Infect Dis & Immunol, Inst Microbiol, Campus Benjamin Franklin, Berlin, Germany
[2] Free Univ Berlin, Campus Benjamin Franklin, Berlin, Germany
[3] Humboldt Univ, Campus Benjamin Franklin, Berlin, Germany
[4] Deutsch Rheuma Forschungszentrum DRFZ, Mucosal & Dev Immunol, Berlin, Germany
[5] Charite Vivantes, Lab Berlin, Dept Microbiol & Hyg, Berlin, Germany
[6] Deutsch Rheuma Forschungszentrum DRFZ, Therapeut Gene Regulat, Berlin, Germany
[7] Charite Univ Med Berlin, Inst Virol, Campus Charite Mitte, Berlin, Germany
[8] Free Univ Berlin, Campus Charite Mitte, Berlin, Germany
[9] Humboldt Univ, Campus Charite Mitte, Berlin, Germany
[10] German Ctr Infect Res DZIF, Partner Site Berlin, Berlin, Germany
[11] Univ Cambridge, Ctr Pathogen Evolut, Dept Zool, Cambridge, England
[12] Charite Univ Med Berlin, Dermatol Allergol, Allergie Ctr Charite, Dept Dermatol & Allergy,Campus Charite Mitte, Berlin, Germany
[13] Fraunhofer Inst Translat Med & Pharmacol ITMP All, Berlin, Germany
[14] Charite Univ Med Berlin, Dept Anesthesiol & Intens Care Med, Campus Benjamin Franklin, Berlin, Germany
[15] Charite Univ Med Berlin, Dept Pediat Gastroenterol Nephrol & Metab Dis, Campus Virchow Klinikum, Berlin, Germany
[16] Free Univ Berlin, Campus Virchow Klinikum, Berlin, Germany
[17] Humboldt Univ, Campus Virchow Klinikum, Berlin, Germany
[18] Charite Univ Med Berlin, Inst Physiol, Ctr Space Med & Extreme Environm Berlin, Berlin, Germany
[19] Free Univ Berlin, Berlin, Germany
[20] Humboldt Univ, Berlin, Germany
[21] Charite Vivantes, Lab Berlin, Dept Immunol, Berlin, Germany
[22] Berlin Inst Hlth BIH, Ctr Digital Hlth, Berlin, Germany
[23] Charite Univ Med Berlin, Berlin, Germany
[24] Charite Univ Med Berlin, Dept Neuropathol, Berlin, Germany
[25] Charite Univ Med Berlin, Inst Med Immunol, Campus Virchow Klinikum, Berlin, Germany
[26] Charite Univ Med Berlin, Dept Pediat Resp Med Immunol & Crit Care Med, Berlin, Germany
[27] Charite Univ Med Berlin, Dept Med Gastroenterol Infect Dis Rheumatol, Berlin, Germany
[28] Berlin Inst Hlth, Campus Benjamin Franklin, Berlin, Germany
[29] German Ctr Lung Res DZL, Associated Partner Berlin, Berlin, Germany
[30] Charite Univ Med Berlin, Lab Mucosal Immun, Inst Microbiol Infect Dis & Immunol, Campus Benjamin Franklin, Berlin, Germany
[31] Peter MacCallum Canc Ctr, Canc Immunol Program, Melbourne, Vic, Australia
[32] Univ Genoa, Dept Expt Med, Genoa, Italy
[33] Deutsch Rheuma Forschungszentrum DRFZ, Chron Inflammat Childhood, Berlin, Germany
[34] Charite Univ Med Berlin, Dept Infect Dis & Resp Med, Berlin, Germany
[35] Univ Med Ctr Hamburg Eppendorf, Bernhard Nocht Inst Trop Med, Dept Trop Med, Hamburg, Germany
[36] Univ Med Ctr Hamburg Eppendorf, Dept Med 1, Hamburg, Germany
[37] Deutsch Rheuma Forschungszentrum DRFZ, Chron Inflammat, Berlin, Germany
[38] Moscow MV Lomonosov State Univ, Belozersky Inst Physicochem Biol, Moscow, Russia
[39] Moscow MV Lomonosov State Univ, Biol Fac, Moscow, Russia
[40] Russian Acad Sci, Ctr Precis Genome Editing & Genet Technol Biomed, Engelhardt Inst Mol Biol, Moscow, Russia
[41] Deutsch Rheuma Forschungszentrum DRFZ, Cell Biol, Berlin, Germany
[42] Charite Univ Med Berlin, BIH Ctr Regenerat Therapies BCRT, Berlin, Germany
基金
俄罗斯基础研究基金会; 欧洲研究理事会;
关键词
NATURAL-KILLER-CELLS; GROWTH-FACTOR-BETA; IGA PRODUCTION; CYTOTOXICITY; HOMEOSTASIS; MATURATION; PERFORIN; REVEALS;
D O I
10.1038/s41586-021-04142-6
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
SARS-CoV-2 is a single-stranded RNA virus that causes COVID-19. Given its acute and often self-limiting course, it is likely that components of the innate immune system play a central part in controlling virus replication and determining clinical outcome. Natural killer (NK) cells are innate lymphocytes with notable activity against a broad range of viruses, including RNA viruses(1,2). NK cell function may be altered during COVID-19 despite increased representation of NK cells with an activated and adaptive phenotype(3,4). Here we show that a decline in viral load in COVID-19 correlates with NK cell status and that NK cells can control SARS-CoV-2 replication by recognizing infected target cells. In severe COVID-19, NK cells show defects in virus control, cytokine production and cell-mediated cytotoxicity despite high expression of cytotoxic effector molecules. Single-cell RNA sequencing of NK cells over the time course of the COVID-19 disease spectrum reveals a distinct gene expression signature. Transcriptional networks of interferon-driven NK cell activation are superimposed by a dominant transforming growth factor-beta (TGF beta) response signature, with reduced expression of genes related to cell-cell adhesion, granule exocytosis and cell-mediated cytotoxicity. In severe COVID-19, serum levels of TGF beta peak during the first two weeks of infection, and serum obtained from these patients severely inhibits NK cell function in a TGF beta-dependent manner. Our data reveal that an untimely production of TGF beta is a hallmark of severe COVID-19 and may inhibit NK cell function and early control of the virus.
引用
收藏
页码:295 / +
页数:30
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