Orthogonal protocols for DNA extraction from filamentous fungi

被引:19
|
作者
Conlon, Benjamin H. [1 ]
Schmidt, Suzanne [1 ]
Poulsen, Michael [1 ]
Shik, Jonathan Z. [1 ,2 ]
机构
[1] Univ Copenhagen, Dept Biol, Sect Ecol & Evolut, Copenhagen, Denmark
[2] Smithsonian Trop Res Inst, Apartado Postal 084303092, Balboa, Ancon, Panama
来源
STAR PROTOCOLS | 2022年 / 3卷 / 01期
基金
欧洲研究理事会;
关键词
Genetics; Genomics; Microbiology; Molecular Biology;
D O I
10.1016/j.xpro.2022.101126
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
There are few protocols available for DNA extraction from fungi. Here we present four complementary protocols for extraction of genomic DNA from fungi. We quantify the efficacy of extractions and compare eight species from five filamentous fungal genera, including both basidiomycetes and ascomycetes. These protocols should be useful for extraction of DNA from a variety of filamentous fungi. For complete details on the use and execution of this protocol, please refer to Conlon et al. (2021).
引用
收藏
页数:11
相关论文
共 50 条
  • [31] Preparation of mitochondria from filamentous fungi
    Mizutani, A
    JOURNAL OF PESTICIDE SCIENCE, 2003, 28 (01): : 99 - 101
  • [32] Facile extraction and purification of filamentous fungal DNA
    1600, Eaton Publishing Co., Natick, MA, USA (18):
  • [33] Comparative analysis of protocols for DNA extraction from soybean caterpillars
    Palma, J.
    Valmorbida, I.
    da Costa, I. F. D.
    Guedes, J. V. C.
    GENETICS AND MOLECULAR RESEARCH, 2016, 15 (02)
  • [34] Evaluation protocols for the extraction of genomic DNA from Bovine blood
    do Amaral, Crispim Bruno
    Vieira, Nascimento Andre
    Renata da Silva, Romero Andrea
    dos Santos, Fernandes Juliana
    Campos, Banari Alexandre
    de Oliveira, Seno Leonardo
    Barufatti, Grisolia Alexeia
    JOURNAL OF THE SELVA ANDINA RESEARCH SOCIETY, 2016, 7 (02) : 95 - 103
  • [35] FACILE EXTRACTION AND PURIFICATION OF FILAMENTOUS FUNGAL DNA
    CHALLEN, MP
    MOORE, AJ
    MARTINEZCARRERA, D
    BIOTECHNIQUES, 1995, 18 (06) : 975 - 978
  • [36] Non liquid nitrogen-based-method for isolation of DNA from filamentous fungi
    Amer, Osama E.
    Mahmoud, Mohamed. A.
    El-Samawaty, AbdEl-Rahim M. A.
    Sayed, Shaban R. M.
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (65): : 14337 - 14341
  • [37] ISOLATION OF DNA FROM FILAMENTOUS FUNGI AND SEPARATION INTO NUCLEAR, MITOCHONDRIAL, RIBOSOMAL, AND PLASMID COMPONENTS
    GARBER, RC
    YODER, OC
    ANALYTICAL BIOCHEMISTRY, 1983, 135 (02) : 416 - 422
  • [38] Filamentous Fungi
    Powers-Fletcher, Margaret V.
    Kendall, Brian A.
    Griffin, Allen T.
    Hanson, Kimberly E.
    MICROBIOLOGY SPECTRUM, 2016, 4 (03):
  • [39] Extraction and PCR amplification of DNA from minute ectoparasitic fungi
    Weir, A
    Blackwell, M
    MYCOLOGIA, 2001, 93 (04) : 802 - 806
  • [40] DIFFERENTIATION OF SPECIES AND STRAINS AMONG FILAMENTOUS FUNGI BY DNA FINGERPRINTING
    MEYER, W
    KOCH, A
    NIEMANN, C
    BEYERMANN, B
    EPPLEN, JT
    BORNER, T
    CURRENT GENETICS, 1991, 19 (03) : 239 - 242