Characterization of the complete mitochondrial genome of Bothrocara hollandi (Perciformes: Zoarcidae)

被引:1
|
作者
Kim, Nack-Keun [1 ]
Andriyono, Sapto [1 ,2 ]
Alam, Jobaidul [1 ]
Kim, Sung-Tae [3 ]
Jung, Kyung Mi [3 ]
Kim, Hyun-Woo [1 ,4 ]
机构
[1] Pukyong Natl Univ, Interdisciplinary Program Biomed Mech & Elect Eng, Busan, South Korea
[2] Univ Airlangga, Fisheries & Marine Fac, Surabaya, Indonesia
[3] Natl Inst Fisheries Sci, Dokdo Fisheries Res Ctr, Pohang, South Korea
[4] Pukyong Natl Univ, Dept Marine Biol, Busan 48513, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词
High-throughput sequencing; Bothrocara hollandi; mitogenome; phylogenetic; eelpout; SEA DEMERSAL FISH;
D O I
10.1080/23802359.2018.1551089
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The full mitogenome of Bothrocara hollandi was determined by high-throughput sequencing (HTS) platform. The genome was 16,732 bp in length, which included 13 protein-coding genes, 22 tRNAs, two ribosomal RNAs (12S and 16S), and a control region (D-Loop). The overall composition of G + C in the mitogenome was 45.90%, which was lower than A + T contents (54.10%). Except for COX1 (GTG), the other twelve protein-coding genes begin with typical start codon, ATG. The incomplete stop codon (TA - or T-) was identified in five genes, including COXI, COXII, COXIII, ND3, and ND4. The phylogenetic analysis with the currently reported mitogenome sequences showed that B. hollandi was most closely related to Lycodes tanakae, suggesting that additional mitogenome sequences in genus Bothrocara are required for its clear evolutional relationship.
引用
下载
收藏
页码:523 / 524
页数:2
相关论文
共 50 条
  • [21] Characterization of the complete mitochondrial genome of the false trevally, Lactarius lactarius (Perciformes: Lactariidae)
    Tabassum, Nazia
    Lee, Ji-Hyun
    Lee, Soo Rin
    Kim, Jeong-Hoon
    Kim, Hyun-Woo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1806 - 1807
  • [22] Characterization of the complete mitochondrial genome of longneck croaker Pseudotolithus typus (Perciformes: Sciaenidae)
    Kim, Jong-Oh
    Seo, Yong Bae
    Shin, Jiyoung
    Yang, Ji-Young
    Kim, Gun-Do
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1167 - 1169
  • [23] Characterization of the complete mitochondrial genome of smallscale blackfish Girella melanichthys (Perciformes: Kyphosidae)
    Kim, Jong-Oh
    Kang, Min-Jae
    Seo, Yong Bae
    Shin, Jiyoung
    Yang, Ji-Young
    Kim, Gun-Do
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1707 - 1708
  • [24] Characterization and phylogenetic analysis of the complete mitochondrial genome of Glossogbius giuris (Perciformes: Gobiidae)
    Wang, Pengfei
    Zhao, Chao
    Fan, Sigang
    Yan, Lulu
    Qiu, Lihua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 395 - 396
  • [25] Characterization and phylogenetic analysis of the complete mitochondrial genome of Terapon theraps (Perciformes: Terapontidae)
    Zeng, Lei
    Chen, Pimao
    Yu, Jie
    Chen, Guobao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 508 - 509
  • [26] Complete sequence of the mitochondrial genome of Odontamblyopus rubicundus (Perciformes: Gobiidae): genome characterization and phylogenetic analysis
    TIANXING LIU
    XIAOXIAO JIN
    RIXIN WANG
    TIANJUN XU
    Journal of Genetics, 2013, 92 : 423 - 432
  • [27] Complete sequence of the mitochondrial genome of Odontamblyopus rubicundus (Perciformes: Gobiidae): genome characterization and phylogenetic analysis
    Liu, Tianxing
    Jin, Xiaoxiao
    Wang, Rixin
    Xu, Tianjun
    JOURNAL OF GENETICS, 2013, 92 (03) : 423 - 432
  • [28] The complete mitochondrial genome of Diploprion bifasciatum (Perciformes, Serranidae)
    Wang, Huan
    Guo, Limei
    Ding, Shao-Xiong
    MITOCHONDRIAL DNA PART A, 2016, 27 (05) : 3137 - 3138
  • [29] The complete mitochondrial genome of the Ephippus orbis (Perciformes: Ephippidae)
    Wang, Qian
    Wu, Zhongjie
    Sun, Dongyan
    Luo, Jian
    MITOCHONDRIAL DNA PART A, 2016, 27 (05) : 3444 - 3445
  • [30] The complete mitochondrial genome of Lophiogobius ocellicauda (Perciformes, Gobiidae)
    Quan, Xianqing
    Jin, Xiaoxiao
    Sun, Yuena
    MITOCHONDRIAL DNA, 2014, 25 (02): : 95 - 97