Unbiased rotational moves for rigid-body dynamics

被引:31
|
作者
Beard, DA
Schlick, T
机构
[1] NYU, Courant Inst Math Sci, Dept Chem, New York, NY 10012 USA
[2] Univ Washington, Dept Bioengn, Seattle, WA 98195 USA
[3] NYU, Howard Hughes Med Inst, New York, NY 10012 USA
关键词
D O I
10.1016/S0006-3495(03)74717-1
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
We introduce an unbiased protocol for performing rotational moves in rigid-body dynamics simulations. This approach - based on the analytic solution for the rotational equations of motion for an orthogonal coordinate system at constant angular velocity - removes deficiencies that have been largely ignored in Brownian dynamics simulations, namely errors for finite rotations that result from applying the noncommuting rotational matrices in an arbitrary order. Our algorithm should thus replace standard approaches to rotate local coordinate frames in Langevin and Brownian dynamics simulations.
引用
收藏
页码:2973 / 2976
页数:4
相关论文
共 50 条
  • [31] Advanced gradientlike methods for rigid-body molecular dynamics
    Omelyan, Igor P.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2007, 127 (04):
  • [32] Uniform Complete Observability of Mass and Rotational Inertial Parameters in Adaptive Identification of Rigid-Body Plant Dynamics
    Paine, Tyler M.
    Whitcomb, Louis L.
    [J]. 2021 IEEE INTERNATIONAL CONFERENCE ON ROBOTICS AND AUTOMATION (ICRA 2021), 2021, : 52 - 58
  • [33] Using rigid-body dynamics to measure joint stiffness
    Becker, PJW
    Wynn, RH
    Berger, EJ
    Blough, JR
    [J]. MECHANICAL SYSTEMS AND SIGNAL PROCESSING, 1999, 13 (05) : 789 - 801
  • [34] 3 NEW CASES OF INTEGRABILITY FOR THE RIGID-BODY DYNAMICS
    KHARLAMOVA, LN
    [J]. DOPOVIDI AKADEMII NAUK UKRAINSKOI RSR SERIYA A-FIZIKO-MATEMATICHNI TA TECHNICHNI NAUKI, 1989, (02): : 40 - 43
  • [35] A SIMPLE APPROXIMATION TO RIGID-BODY DYNAMICS FOR COMPUTER ANIMATION
    VANOVERVELD, CWAM
    [J]. JOURNAL OF VISUALIZATION AND COMPUTER ANIMATION, 1994, 5 (01): : 17 - 36
  • [36] LIE-POISSON INTEGRATION FOR RIGID-BODY DYNAMICS
    LI, S
    QIN, MZ
    [J]. COMPUTERS & MATHEMATICS WITH APPLICATIONS, 1995, 30 (09) : 105 - 118
  • [37] Rigid-body molecular dynamics of DNA inside a nucleosome
    Arman Fathizadeh
    Azim Berdy Besya
    Mohammad Reza Ejtehadi
    Helmut Schiessel
    [J]. The European Physical Journal E, 2013, 36
  • [38] ON SO-CALLED SINGULAR CONSTRAINTS IN RIGID-BODY DYNAMICS
    FELSZEGHY, SF
    [J]. AMERICAN JOURNAL OF PHYSICS, 1986, 54 (07) : 585 - 586
  • [39] Processed splitting algorithms for rigid-body molecular dynamics simulations
    Omelyan, Igor P.
    [J]. PHYSICAL REVIEW E, 2008, 78 (02):
  • [40] Combinatory Attitude Determination Method for High Rotational Speed Rigid-Body Aircraft
    An, Liangliang
    Wang, Liangming
    Liu, Ning
    Fu, Jian
    [J]. MATHEMATICAL PROBLEMS IN ENGINEERING, 2020, 2020