Incremental discovery of irredundant motif bases in time O(|Σ|n2 log n) (Extended abstract)

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作者
Apostolico, Alberto [1 ]
Tagliacollo, Claudia
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[1] Georgia Inst Technol, Atlanta, GA 30332 USA
[2] Univ Padua, I-35100 Padua, Italy
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Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
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页码:136 / 148
页数:13
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