The complete chloroplast genome sequence of Fargesia qinlingensis (Poaceae): an endemic to China

被引：0

作者：

Zhou, Ya Fu ^{[1
,2
]}

Wang, Yu Chao ^{[1
,2
]}

Ni, Xi Lu ^{[3
]}

Mao, Shao Li ^{[1
,2
]}

机构：

[1] Inst Bot Shaanxi Prov, Xian Bot Garden Shaanxi Prov, Xian, Shaanxi, Peoples R China

[2] Shaanxi Engn Res Ctr Conservat & Utilizat Bot Res, Xian, Shaanxi, Peoples R China

[3] Ningxia Forestry Inst, Yinchuan, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

基金：

中国国家自然科学基金;

关键词：

Fargesia qinlingensis; chloroplast genome; endemic species; GIANT PANDAS;

D O I：

10.1080/23802359.2018.1473739

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete chloroplast genome of Fargesia qinlingensis (Poaceae) has been reconstructed from the whole-genome Illumina sequencing data. The complete chloroplast genome sequence of F. qinlingensis obtained in this study was 139,640 bp in length, with a large single copy (LSC) region of 83,220 bp, a small single copy (SSC) region of 12,826 bp, separated by two inverted repeat (IR) regions of 21,797 bp each. The GC content was 38.9%, and in the LSC, SSC, and IR regions were 37.0%, 33.2%, and 44.2%, respectively. A total of 130 genes were annotated, including 83 protein-coding genes (PCGs), 39 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The result of the phylogenetic analysis showed that F. qinlingensis was more closely related to the species of F. denudata.

引用

页码：613 / 614

页数：2

共 50 条

[41] Complete chloroplast genome sequence and phylogenetic analysis of Sinojackia sarcocarpa, an endemic plant in Southwest China
Fan, Jing
Fu, Qin-Chao
Liang, Zi
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1350 - 1351
[42] Complete chloroplast genome sequence of Heteroplexis sericophylla (Asteraceae), a rare and vulnerable species endemic to China
Shi, Yancai
Zhang, Ying
Liu, Bingbing
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3719 - 3720
[43] Complete chloroplast genome sequence of Semiliquidambar cathayensis (hamamelidaceae), a rare and endangered species endemic to China
Shi, Yancai
Duan, Na
Liu, Bingbing
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3252 - 3253
[44] The complete chloroplast genome sequence of Oberonia seidenfadenii (Orchidaceae), a rare plant species endemic to China
Jiang, Ming
Wang, Junfeng
Chen, Minghui
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3362 - 3363
[45] The complete chloroplast genome sequence of Cerasus jingningensis (Rosaceae), an endemic plant to Zhejiang province, China
Jiang, Ming
Wang, Junfeng
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3511 - 3512
[46] Characterization of the complete chloroplast genome sequence of Ulmus chenmoui (Ulmaceae), an endangered plant endemic to China
Zhang, Yunyan
Zhuang, Xin
Li, Junke
Li, Pengfu
Wang, Zhongsheng
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 482 - 484
[47] The complete chloroplast genome sequence of Chimonobambusa luzhiensis, an endangered species endemic to Guizhou Province, China
Wu, Mingli
Liu, Yanjiang
Xu, Xue
Zhu, Xiao
Gou, Guangqian
Dai, Zhaoxia
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (07): : 1360 - 1361
[48] Complete chloroplast genome sequence of Dysosma versipellis (Berberidaceae), a rare and threatened species endemic to China
Shi, Yancai
Yuan, Haiping
Zou, Rong
Liu, Bingbing
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4218 - 4219
[49] Characterization of the complete chloroplast genome sequence of Impatiens pritzelii (Balsaminaceae): an endemic species from China
Wang, Qian
Li, Wen-Qiao
Ding, Bo
Deng, Hong-Ping
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4073 - 4074
[50] Complete chloroplast genome of Isoetes sinensis, an endemic fern in China
Xie, YaCong
Cheng, Hui-Shan
Chen, Yu
Liu, Zhong-Jian
Lin, Si-Zu
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3276 - 3277

← 1 2 3 4 5 →