Classifying prostate cancer patients based on total prostate-specific antigen and free prostate-specific antigen features by support vector machine
被引:9
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作者:
Nguyen Thi Hong Nhung
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机构:
Ho Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, VietnamHo Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, Vietnam
Nguyen Thi Hong Nhung
[1
]
Vu Tran Minh Khuong
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机构:
Univ Sci, Fac Math & Comp Sci, Ho Chi Minh City, VietnamHo Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, Vietnam
Vu Tran Minh Khuong
[3
]
Vu Quang Huy
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机构:
Ho Chi Minh City Univ Med & Pharm, Med Lab Falculty, Nursing & Med Technol, Ho Chi Minh City, VietnamHo Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, Vietnam
Vu Quang Huy
[2
]
Pham The Bao
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Univ Sci, Fac Math & Comp Sci, Ho Chi Minh City, VietnamHo Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, Vietnam
Pham The Bao
[3
]
机构:
[1] Ho Chi Minh City Univ Med & Pharm, Dept Basic Sci, Ho Chi Minh City, Vietnam
[2] Ho Chi Minh City Univ Med & Pharm, Med Lab Falculty, Nursing & Med Technol, Ho Chi Minh City, Vietnam
[3] Univ Sci, Fac Math & Comp Sci, Ho Chi Minh City, Vietnam
Free prostate-specific antigen;
prostate cancer;
support vector machine;
total prostate-specific antigen;
MEN;
D O I:
10.4103/0973-1482.172133
中图分类号:
R73 [肿瘤学];
学科分类号:
100214 ;
摘要:
Aims of Study: In this work, we enhanced the role of prostate-specific antigen (PSA) test by examining the relation between free PSA (fPSA) and total PSA (tPSA) value and other biological information such as age and volume of prostate. Our primary goal is to find an approach that improves the sensitivity but still give a reasonable specificity. Subjects and Methods: We proposed a new approach to predict the prostate cancer (PCa) based on tPSA, fPSA, age, and prostate volume by using combination of statistical techniques and support vector machine (SVM). Our approach detected PCa based on following two steps: Classifying patients into normal or abnormal group by means of SVM method and then predicting which patients in abnormal group with PCa. Results: The sensitivity of our system was 95.1%, whereas the specificity was acceptable (84.6%). The positive biopsy rate was 58% while the unnecessary biopsy rate was 15.4%. We further developed a program to assist clinicians in predicting PCa. Conclusions: Applying SVM not only improved the performance of PSA test in screening and detecting PCa but also explored some molecular information. Based on the information, we can discover more knowledge about cancer disease.
机构:
Med Univ Graz, Dept Pathol, Graz, Austria
Cornell Univ, Weill Cornell Med Coll, New York, NY 10021 USAUniv Clin Eppendorf, Dept Urol, Hamburg, Germany
机构:
Nanjing Med Univ, Dept Lab Med, Affiliated Hosp 1, Nanjing, Jiangsu, Peoples R China
Oriental & Foreign Related Hosp, Dept Lab Med, Lianyungang, Peoples R ChinaNanjing Med Univ, Dept Lab Med, Affiliated Hosp 1, Nanjing, Jiangsu, Peoples R China
Huang, Hui-Qing
Zhang, Yan
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机构:
Nanjing Med Univ, Dept Lab Med, Affiliated Hosp 1, Nanjing, Jiangsu, Peoples R ChinaNanjing Med Univ, Dept Lab Med, Affiliated Hosp 1, Nanjing, Jiangsu, Peoples R China