Radiomics features based on internal and marginal areas of the tumor for the preoperative prediction of microsatellite instability status in colorectal cancer

被引:5
|
作者
Ma, Yi [1 ]
Lin, Changsong [2 ]
Liu, Song [1 ]
Wei, Ying [3 ]
Ji, Changfeng [1 ]
Shi, Feng [3 ]
Lin, Fan [4 ]
Zhou, Zhengyang [1 ]
机构
[1] Nanjing Med Univ, Dept Radiol, Nanjing Drum Tower Hosp Clin Coll, Nanjing, Peoples R China
[2] Nanjing Med Univ, Dept Bioinformat, Nanjing, Peoples R China
[3] Shanghai United Imaging Intelligence Co Ltd, Dept Res & Dev, Shanghai, Peoples R China
[4] Nanjing Med Univ, Dept Cell Biol, Nanjing, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2022年 / 12卷
关键词
microsatellite instability; radiomics; colorectal cancer; internal and marginal; computed tomography; LYNCH-SYNDROME; ASSOCIATION; RECURRENCE; GUIDELINES; PROGNOSIS;
D O I
10.3389/fonc.2022.1020349
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
ObjectivesTo explore whether the preoperative CT radiomics can predict the status of microsatellite instability (MSI) in colorectal cancer (CRC) patients and identify the region with the most stable and high-efficiency radiomics features. MethodsThis retrospective study involved 230 CRC patients with preoperative computed tomography scans and available MSI status between December 2019 and October 2021. Image segmentation and radiomic feature extraction were performed as follows. First, slices with the maximum tumor area (region of interest, ROI) were manually contoured. Subsequently, each ROI was shrunk inward by 1, 2, and 3 mm, respectively, where the remaining ROIs were considered as the internal region of the tumor (named as IROI1, IROI2, and IROI3), and the shrunk regions were considered as marginal regions of the tumor (named as MROI1, MROI2, and MROI3). Finally, radiomics features were extracted from each of the ROI. The intraclass correlation coefficient and least absolute shrinkage and selection operator method were used to choose the most reliable and relevant features of MSI status. Clinical, radiomics, and combined clinical radiomics models have been established. Calibration curve and decision curve analyses (DCA) were generated to explore the correction effect and assess the clinical applicability of the above models, respectively. ResultsIn the testing cohort, the radiomics model based on IROI3 yielded the highest average area under the curve (AUC) value of 0.908, compared with the remaining radiomics models. Additionally, hypertension and N stage were considered as clinically independent factors of MSI status. The combined clinical radiomics model achieved excellent diagnostic efficacy (AUC: 0.928; sensitivity: 0.840; specificity: 0.867) in the testing cohort, as well as favorable calibration and clinical utility by calibration curve and DCA analyses. ConclusionsThe IROI3 model, which is based on a 3-mm shrink in the largest areas of the tumor, could noninvasively reflect the heterogeneity and genetic instability within the tumor. This suggests that it is an important biomarker for the preoperative prediction of MSI status. The model can extract more robust and effective radiomics features, which lays a foundation for the radiomics study of hollow organs, such as in CRC.
引用
收藏
页数:12
相关论文
共 50 条
  • [31] Clinicopathologic features in colorectal cancer patients with microsatellite instability
    Raut, CP
    Pawlik, TM
    Rodriguez-Bigas, MA
    MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2004, 568 (02) : 275 - 282
  • [32] Microsatellite instability and the clinicopathological features of sporadic colorectal cancer
    Ward, R
    Meagher, A
    Tomlinson, I
    O'Connor, T
    Norrie, M
    Wu, R
    Hawkins, N
    GUT, 2001, 48 (06) : 821 - 829
  • [33] Evaluation of microsatellite instability status by immunohistochemistry in colorectal cancer
    Dagher, Carole
    Sader-Ghorra, Claude
    Abadjian, Gerard
    MODERN PATHOLOGY, 2006, 19 : 56 - 57
  • [34] Preoperative Prediction of BRAF Mutation Status in Colorectal Cancer Using a Clinical-radiomics Model
    Xue, Ting
    Peng, Hui
    Chen, Qiaoling
    Li, Manman
    Duan, Shaofeng
    Feng, Feng
    ACADEMIC RADIOLOGY, 2022, 29 (09) : 1298 - 1307
  • [35] PAIP 2020: Microsatellite instability prediction in colorectal cancer
    Kim, Kyungmo
    Lee, Kyoungbun
    Cho, Sungduk
    Kang, Dong Un
    Park, Seongkeun
    Kang, Yunsook
    Kim, Hyunjeong
    Choe, Gheeyoung
    Moon, Kyung Chul
    Lee, Kyu Sang
    Park, Jeong Hwan
    Hong, Choyeon
    Nateghi, Ramin
    Pourakpour, Fattaneh
    Wang, Xiyue
    Yang, Sen
    Jahromi, Seyed Alireza Fatemi
    Khani, Aliasghar
    Kim, Hwa-Rang
    Choi, Doo-Hyun
    Han, Chang Hee
    Kwak, Jin Tae
    Zhang, Fan
    Han, Bing
    Ho, David Joon
    Kang, Gyeong Hoon
    Chun, Se Young
    Jeong, Won-Ki
    Park, Peom
    Choi, Jinwook
    MEDICAL IMAGE ANALYSIS, 2023, 89
  • [36] A radiomics model fusing clinical features to predict microsatellite status preoperatively in colorectal cancer liver metastasis
    Wang, Xuehu
    Liu, Ziqi
    Yin, Xiaoping
    Yang, Chang
    Zhang, Jushuo
    BMC GASTROENTEROLOGY, 2023, 23 (01)
  • [37] A radiomics model fusing clinical features to predict microsatellite status preoperatively in colorectal cancer liver metastasis
    Xuehu Wang
    Ziqi Liu
    Xiaoping Yin
    Chang Yang
    Jushuo Zhang
    BMC Gastroenterology, 23
  • [38] Tumor mutation burden and microsatellite instability in colorectal cancer
    Fenizia, Francesca
    Pasquale, Raffaella
    Roma, Cristin
    Bergantino, Francesca
    Rachiglio, Anna Maria
    Chicchinelli, Nicoletta
    Graziano, Paolo
    Botti, Gerardo
    Tatangelo, Fabiana
    Scognamiglio, Giosue
    Allen, Christopher
    Lambiase, Matilde
    Iannaccone, Alessia
    Normanno, Nicola
    CANCER RESEARCH, 2019, 79 (13)
  • [39] Magnetic resonance-based radiomics nomogram for predicting microsatellite instability status in endometrial cancer
    Lin, Zijing
    Wang, Ting
    li, Haiming
    Xiao, Meiling
    Ma, Xiaoliang
    Gu, Yaji
    Qiang, Jinwei
    QUANTITATIVE IMAGING IN MEDICINE AND SURGERY, 2023, 13 (01) : 108 - 120
  • [40] Tumor microsatellite instability and clinicopathologic features in Iranian colorectal cancer patients at risk for Lynch syndrome
    Zeinalian, Mehrdad
    Hashemzadeh-Chaleshtori, Morteza
    Salehi, Rasoul
    Kazemi, Mohammad
    Emami, Mohammad Hassan
    JOURNAL OF RESEARCH IN MEDICAL SCIENCES, 2015, 20 (02): : 154 - 160