Accelerating ab initio QM/MM computations using a Supercharger QM module

被引:0
|
作者
Naidoo, Kevin J.
Fernandes, Kyle
Renison, Alicia
机构
[1] Univ Cape Town, Dept Chem, ZA-7925 Cape Town, South Africa
[2] Univ Cape Town, Sci Comp Res Unit, ZA-7925 Cape Town, South Africa
关键词
FREE-ENERGY VOLUMES; ASSOCIATION;
D O I
暂无
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
177-COMP
引用
收藏
页数:1
相关论文
共 50 条
  • [31] Ab initio and QM/MM study of electron addition on the disulfide bond in thioredoxin
    Rickard, Gail A.
    Berges, Jacqueline
    Houee-Levin, Chantal
    Rauk, Arvi
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2008, 112 (18): : 5774 - 5787
  • [32] New Ewald method for ab initio QM/MM molecular dynamics simulation
    Giese, Timothy
    York, Darrin
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 252
  • [33] Representation of the QM Subsystem for Long-Range Electrostatic Interaction in Non-Periodic Ab Initio QM/MM Calculations
    Pan, Xiaoliang
    Rosta, Edina
    Shao, Yihan
    [J]. MOLECULES, 2018, 23 (10):
  • [34] Development of a perturbative approach for Monte Carlo simulations using a hybrid ab initio QM/MM method
    Truong, TN
    Stefanovich, EV
    [J]. CHEMICAL PHYSICS LETTERS, 1996, 256 (03) : 348 - 352
  • [35] Mixed ab initio QM/MM modeling using frozen orbitals and tests with alanine dipeptide and tetrapeptide
    Philipp, DM
    Friesner, RA
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1999, 20 (14) : 1468 - 1494
  • [36] PHYS 300-Techniques for free energies estimation using ab initio QM/MM methods
    Brooks, Bernard R.
    Woodcock, H. Lee, III
    Zheng, Wenjun
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 234
  • [37] Ab initio QM/MM and molecular dynamics study on proton pump mechanism of bacteriorhodopsin
    Hayashi, S
    Ohmine, I
    Schulten, K
    [J]. BIOPHYSICAL JOURNAL, 2001, 80 (01) : 603A - 604A
  • [38] Ab initio and hybrid QM/MM simulations on massively parallel supercomputers: Experience at ERDC
    Isayev, Olexandr
    Leszczynski, Jerzy
    Gorb, Leonid
    Hill, Frances
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 237
  • [39] How Is Acetylcholinesterase Phosphonylated by Soman? An Ab Initio QM/MM Molecular Dynamics Study
    Sirin, Gulseher Sarah
    Zhang, Yingkai
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2014, 118 (39): : 9132 - 9139
  • [40] QM/MM Computations of molecular oscillations in heme proteins
    Freindorf, Marek
    Furlani, Thomas R.
    Kong, Jing
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2005, 230 : U2964 - U2964