MSA-PAD: DNA multiple sequence alignment framework based on PFAM accessed domain information

被引：4

作者：

Balech, Bachir ^{[1
]}

Vicario, Saverio ^{[2
]}

Donvito, Giacinto ^{[3
]}

Monaco, Alfonso ^{[3
]}

Notarangelo, Pasquale ^{[3
]}

Pesole, Graziano ^{[1
,4
]}

机构：

[1] CNR, Ist Biomembrane & Bioenerget, I-70126 Bari, Italy

[2] CNR, Ist Tecnol Biomed, I-70126 Bari, Italy

[3] Ist Nazl Fis Nucl, I-70126 Bari, Italy

[4] Univ Bari, Dipartimento Biosci Biotecnol & Biofarmaceut, I-70126 Bari, Italy

来源：

BIOINFORMATICS | 2015年 / 31卷 / 15期

基金：

欧盟第七框架计划;

关键词：

D O I：

10.1093/bioinformatics/btv141

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Here we present the MSA-PAD application, a DNA multiple sequence alignment framework that uses PFAM protein domain information to align DNA sequences encoding either single or multiple protein domains. MSA-PAD has two alignment options: gene and genome mode.

引用

页码：2571 / 2573

页数：3

共 26 条

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