DNA extraction and PCR amplification method suitable for fresh, herbarium-stored, lichenized, and other fungi

被引:345
|
作者
Cubero, OF [1 ]
Crespo, A
Fatehi, J
Bridge, PD
机构
[1] Univ Complutense, Dept Biol Vegetal 2, E-28040 Madrid, Spain
[2] CABI Biosci UK Ctr Egham, Egham TW20 9TY, Surrey, England
关键词
herbarium; DNA extraction; filamentous fungi; lichenized fungi;
D O I
10.1007/BF01084401
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
This paper presents a DNA extraction method suitable for fresh, herbarium-stored, lichenized and other fungal specimens. The method is fast and reliable, comparatively inexpensive and is suitable for obtaining PCR amplification quality DNA from large numbers of samples in a short time. The method has been tested with over 300 samples of Ascochyta, Phyllosticta, Ramalina, Parmelia and Physconia. Amplifiable fungal DNA was extracted from pure cultures, leaf lesions, whole thalli and dissected "only-fungal" sections of lichenized fungi. In addition, the method has proved suitable for use with herbarium specimens of both lichenized and non-lichenized fungi, stored as dried pure cultures or dried infected plant material.
引用
收藏
页码:243 / 249
页数:7
相关论文
共 50 条
  • [11] Rapid DNA extraction for screening soil filamentous fungi using PCR amplification
    Plaza, GA
    Upchurch, R
    Brigmon, RL
    Whitman, WB
    Ulfig, K
    POLISH JOURNAL OF ENVIRONMENTAL STUDIES, 2004, 13 (03): : 315 - 318
  • [12] Development of rapid DNA extraction and PCR amplification methods for fungi and parasitic plants
    Khoo, Ying Wei
    Li, Shifang
    Chong, Khim Phin
    ZEMDIRBYSTE-AGRICULTURE, 2022, 109 (03) : 283 - 286
  • [13] OPTIMIZED METHOD FOR DNA EXTRACTION AND PCR AMPLIFICATION IN AROEIRA TREE
    Silva, Jailson Do Nascimento
    Linhares, Amanda Camila Dos Santos
    Palmieri, Dario Abel
    Costa, Marcones Ferreira
    De Sa, Gisele Holanda
    Da Costa Gomes, Maria Fernanda
    Dos Santos, Michelli Ferreira
    Feitoza, Lidiane De Lima
    Dos Santos Valente, Sergio Emilio
    BIOSCIENCE JOURNAL, 2023, 39
  • [14] A rapid DNA extraction method for quantitative real-time PCR amplification from fresh water sediment
    Lu, Shimin
    Liao, Mingjun
    Zhang, Min
    Qi, Pengzhi
    Xie, Congxin
    He, Xugang
    JOURNAL OF FOOD AGRICULTURE & ENVIRONMENT, 2012, 10 (3-4): : 1252 - 1255
  • [15] A rapid DNA minipreparation method suitable for AFLP and other PCR applications
    Chen, DH
    Ronald, PC
    PLANT MOLECULAR BIOLOGY REPORTER, 1999, 17 (01) : 53 - 57
  • [16] A one-step Candida albicans DNA extraction method using ''Chelex(R) 100 Resin'' suitable for DNA amplification (PCR)
    Bernal, M
    BaqueroMezence, MI
    Provost, F
    Laurent, F
    MartinezMachin, G
    Boiron, P
    JOURNAL DE MYCOLOGIE MEDICALE, 1997, 7 (01): : 53 - 54
  • [17] A Rapid DNA Minipreparation Method Suitable for AFLP and Other PCR Applications
    D.-H. Chen
    P.C. Ronald
    Plant Molecular Biology Reporter, 1999, 17 : 53 - 57
  • [18] A method for direct soil extraction and PCR amplification of endomycorrhizal fungal DNA
    Claassen, VP
    Zasoski, RJ
    Tyler, BM
    MYCORRHIZA, 1996, 6 (05) : 447 - 450
  • [19] A rapid DNA extraction method for PCR amplification from wetland soils
    Li, J.
    Li, B.
    Zhou, Y.
    Xu, J.
    Zhao, J.
    LETTERS IN APPLIED MICROBIOLOGY, 2011, 52 (06) : 626 - 633
  • [20] Experiments in DNA extraction and PCR amplification from bighorn sheep feces: the importance of DNA extraction method
    Wehausen, JD
    Ramey, RR
    Epps, CW
    JOURNAL OF HEREDITY, 2004, 95 (06) : 503 - 509