Room-temperature macromolecular serial crystallography using synchrotron radiation

被引:192
|
作者
Stellato, Francesco [1 ]
Oberthuer, Dominik [1 ,2 ]
Liang, Mengning [1 ]
Bean, Richard [1 ]
Gati, Cornelius [1 ]
Yefanov, Oleksandr [1 ]
Barty, Anton [1 ]
Burkhardt, Anja [3 ]
Fischer, Pontus [3 ]
Galli, Lorenzo [1 ,4 ]
Kirian, Richard A. [1 ]
Meyer, Jan [3 ]
Panneerselvam, Saravanan [3 ]
Yoon, Chun Hong [1 ,5 ]
Chervinskii, Fedor [6 ]
Speller, Emily [7 ]
White, Thomas A. [1 ]
Betzel, Christian [2 ,8 ]
Meents, Alke [3 ]
Chapman, Henry N. [1 ,4 ,8 ]
机构
[1] DESY, Ctr Free Electron Laser Sci, D-22607 Hamburg, Germany
[2] Univ Hamburg, Inst Biochem & Mol Biol, D-22607 Hamburg, Germany
[3] DESY, Photon Sci, D-22607 Hamburg, Germany
[4] Univ Hamburg, Dept Phys, D-22607 Hamburg, Germany
[5] European XFEL GmbH, D-22761 Hamburg, Germany
[6] Moscow Inst Phys & Technol, Moscow 141700, Russia
[7] Univ York, Dept Phys, York YO10 5DD, N Yorkshire, England
[8] Ctr Ultrafast Imaging, D-22761 Hamburg, Germany
来源
IUCRJ | 2014年 / 1卷
关键词
serial crystallography; room-temperature protein crystallography; radiation damage; CrystFEL; microfocus beamline; X-RAY-SCATTERING; PROTEIN CRYSTALLIZATION; STRUCTURE REFINEMENT; DAMAGE; DIFFRACTION; CRYSTALS; DENSITY; PHENIX;
D O I
10.1107/S2052252514010070
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A new approach for collecting data from many hundreds of thousands of microcrystals using X-ray pulses from a free-electron laser has recently been developed. Referred to as serial crystallography, diffraction patterns are recorded at a constant rate as a suspension of protein crystals flows across the path of an X-ray beam. Events that by chance contain single-crystal diffraction patterns are retained, then indexed and merged to form a three-dimensional set of reflection intensities for structure determination. This approach relies upon several innovations: an intense X-ray beam; a fast detector system; a means to rapidly flow a suspension of crystals across the X-ray beam; and the computational infrastructure to process the large volume of data. Originally conceived for radiation-damage-free measurements with ultrafast X-ray pulses, the same methods can be employed with synchrotron radiation. As in powder diffraction, the averaging of thousands of observations per Bragg peak may improve the ratio of signal to noise of low-dose exposures. Here, it is shown that this paradigm can be implemented for room-temperature data collection using synchrotron radiation and exposure times of less than 3 ms. Using lysozyme microcrystals as a model system, over 40 000 single-crystal diffraction patterns were obtained and merged to produce a structural model that could be refined to 2.1 angstrom resolution. The resulting electron density is in excellent agreement with that obtained using standard X-ray data collection techniques. With further improvements the method is well suited for even shorter exposures at future and upgraded synchrotron radiation facilities that may deliver beams with 1000 times higher brightness than they currently produce.
引用
收藏
页码:204 / 212
页数:9
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