Complete chloroplast genome sequence ofStachys japonica(Labiatae)

被引：3
|
作者：
Wang, Mingcheng [1 ]
Zhao, Qi [1 ]
Jiang, Dechun [2 ,3 ]
Wang, Zhiqiang [1 ]
机构：
[1] Chengdu Univ, Inst Adv Study, Chengdu, Peoples R China
[2] Chinese Acad Sci, Chengdu Inst Biol, CAS Key Lab Mt Ecol Restorat & Bioresource Utiliz, Chengdu, Peoples R China
[3] Chinese Acad Sci, Chengdu Inst Biol, Ecol Restorat & Biodivers Conservat Key Lab Sichu, Chengdu, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
基金：
中国国家自然科学基金;
关键词：
Stachys japonica; chloroplast genome; phylogenetic analyses;
D O I：
10.1080/23802359.2020.1787263
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete chloroplast genome ofStachys japonicawas reconstructed by reference-based assembly using Illumina paired-end data. The assembled plastome is 150,599 base pairs (bp) in length, including a pair of inverted repeat regions (IRs) of 25,654 bp each, a large single-copy region (LSC) of 81,701 bp and a small single-copy region (SSC) of 17,590 bp. A total of 131 genes were predicted from the chloroplast genome, including 86 protein coding genes, 37 tRNA genes and 8 rRNA genes. The overall GC content ofS. japonicachloroplast genome was 38.5%. Phylogenetic analysis with several reported chloroplast genomes showed thatS. japonicais closely clustered withS. sylvatica. The complete chloroplast genome ofS. japonicaprovides new insight into Labiatae evolutionary and genomic studies.
引用
收藏
页码：2675 / 2676
页数：2
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