Named Entity Recognition and Normalization: A Domain-Specific Language Approach

被引：0
|
作者：
Vazquez, Miguel
Chagoyen, Monica
Pascual-Montano, Alberto
机构：
来源：
2ND INTERNATIONAL WORKSHOP ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (IWPACBB 2008) | 2009年 / 49卷
关键词：
GENE NAME;
D O I：
暂无
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
We present, RNer, a tool that performs Named Entity Recognition and Normalization of gene and protein mentions on biomedical text. The tool we present not only offers a complete solution to the problem, but it does so by providing easily configurable framework, that abstracts the algorithmic details front the domain specific. Configuration and tuning for particular tasks is done using domain specific languages, clearer and more succinct, yet equally expressive that general purpose languages. An evaluation of the system is carried using the BioCreative datasets.
引用
收藏
页码：147 / 155
页数：9
相关论文
共 50 条
  • [31] Using Language Independent and Language Specific Features to Enhance Arabic Named Entity Recognition
    Benajiba, Yassine
    Diab, Mona
    Rosso, Paolo
    INTERNATIONAL ARAB JOURNAL OF INFORMATION TECHNOLOGY, 2009, 6 (05) : 464 - 472
  • [32] Named entity recognition for Psychological domain: challenges in document annotation for the Arabic Language
    Lakel, Kheira
    Bendella, Fatima
    Benkhadda, Samira
    PROCEEDINGS OF 2017 FIRST INTERNATIONAL CONFERENCE ON EMBEDDED & DISTRIBUTED SYSTEMS (EDIS 2017), 2017, : 39 - 43
  • [33] Domain-Specific Entity Recognition as Token-Pair Relation Classification
    Liu, Jinxuan
    Shi, Hongxun
    Li, Chuankun
    Chang, Qingtao
    Wang, Jianbin
    IEEE ACCESS, 2023, 11 : 118363 - 118371
  • [34] Named entity recognition in Odia language: a rule-based approach
    Anandika A.
    Chakravarty S.
    Paikaray B.K.
    International Journal of Reasoning-based Intelligent Systems, 2023, 15 (01) : 15 - 21
  • [35] An Approach of Defining Domain Constraints for Domain-Specific Modeling Language
    Jiang, Tao
    Zhou, Weihong
    INTERNATIONAL JOURNAL OF PATTERN RECOGNITION AND ARTIFICIAL INTELLIGENCE, 2021, 35 (09)
  • [36] Leveraging knowledge graph for domain-specific Chinese named entity recognition via lexicon-based relational graph transformer
    Gao, Yunbo
    Gong, Guanghong
    Ye, Bipeng
    Tian, Xingyu
    Li, Ni
    Yuan, Haitao
    INTERNATIONAL JOURNAL OF BIO-INSPIRED COMPUTATION, 2023, 21 (03) : 148 - 162
  • [37] Named Entity Recognition in the Domain of Geographical Subject
    Xu, Feifei
    Li, Huiying
    Li, Xuelian
    2017 13TH INTERNATIONAL CONFERENCE ON NATURAL COMPUTATION, FUZZY SYSTEMS AND KNOWLEDGE DISCOVERY (ICNC-FSKD), 2017, : 2229 - 2234
  • [38] Supervised Named Entity Recognition in Assamese language
    Talukdar, Gitimoni
    Borah, Pranjal Protim
    Baruah, Arup
    2014 INTERNATIONAL CONFERENCE ON CONTEMPORARY COMPUTING AND INFORMATICS (IC3I), 2014, : 187 - 191
  • [39] Named Entity Recognition System for Sindhi Language
    Jumani, Awais Khan
    Memon, Mashooque Ahmed
    Khoso, Fida Hussain
    Sanjrani, Anwar Ali
    Soomro, Safeeullah
    EMERGING TECHNOLOGIES IN COMPUTING, ICETIC 2018, 2018, 200 : 237 - 246
  • [40] A LANGUAGE INDEPENDENT NAMED ENTITY RECOGNITION SYSTEM
    Gifu, Daniela
    Vasilache, Gabriela
    PROCEEDINGS OF THE 10TH INTERNATIONAL CONFERENCE 'LINQUISTIC RESOURCES AND TOOLS FOR PROCESSING THE ROMANIAN LANGUAGE', 2014, 2014, : 181 - 188
12345