Z39Ig is co-expressed with activated macrophage genes

被引:30
|
作者
Walker, MG [1 ]
机构
[1] Incyte Genom, Palo Alto, CA 94304 USA
关键词
Z39Ig; gene expression analysis; activated macrophage;
D O I
10.1016/S0167-4781(01)00358-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Z39Ig is a recently-identified gene with inimunoglobulin-like domains whose function is unknown. We examined expression of Z39Ig in 1432 human cDNA libraries, and found it primarily in synovium of patients with rheumatoid arthritis, in placenta, and in lung. We analyzed its co-expression pattern using the Guilt-by-Association (GBA) algorithm, and found that it is most similar in expression to early genes in the classical complement system (CIqA, CIqB, CIqC, Clr, and C 1 inhibitor), MHC class 11 genes (HLA-DR alpha, HLA-DR beta 1, and HLA-DP alpha 1), Fc receptors (Fe gamma RIIa and Fc epsilon RI), lysosomal protein (LAPTm5), tissue transglutaminase, and macrophage receptors (MARCO and CD163/M130). The sequence and expression data suggest that Z39Ig is a cell surface receptor, expressed in activated macrophages, and linked with the classical complement system, most likely in phagocytosis preceding antigen presentation. Knowledge of this gene may contribute to better understanding of the role of complement and activated macrophages in rheumatoid arthritis and systemic lupus. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:387 / 390
页数:4
相关论文
共 50 条
  • [21] Clusters of co-expressed genes in mammalian genomes are conserved by natural selection
    Singer, GAC
    Lloyd, AT
    Huminiecki, LB
    Wolfe, KH
    MOLECULAR BIOLOGY AND EVOLUTION, 2005, 22 (03) : 767 - 775
  • [22] Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes
    Alexander P. S. Darlington
    Juhyun Kim
    José I. Jiménez
    Declan G. Bates
    Nature Communications, 9
  • [23] Analysis of promoter regions of co-expressed genes identified by microarray analysis
    Srinivas Veerla
    Mattias Höglund
    BMC Bioinformatics, 7
  • [24] Using Formal Concept Analysis for the Extraction of Groups of Co-expressed Genes
    Kaytoue-Uberall, Mehdi
    Duplessis, Sebastien
    Napoli, Amedeo
    MODELLING, COMPUTATION AND OPTIMIZATION IN INFORMATION SYSTEMS AND MANAGEMENT SCIENCES, PROCEEDINGS, 2008, 14 : 439 - +
  • [25] Analysis of promoter regions of co-expressed genes identified by microarray analysis
    Veerla, Srinivas
    Hoglund, Mattias
    BMC BIOINFORMATICS, 2006, 7 (1)
  • [26] CHROMOSOMAL LOCATION OF THE CO-EXPRESSED HUMAN SKELETAL AND CARDIAC ACTIN GENES
    GUNNING, P
    PONTE, P
    KEDES, L
    EDDY, R
    SHOWS, T
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (06): : 1813 - 1817
  • [27] RETRACTED ARTICLE: Regional patterning of co-expressed genes in autistic brains
    Fereshteh Izadi
    Network Modeling Analysis in Health Informatics and Bioinformatics, 2019, 8
  • [28] Analysis of Regulatory and Interaction Networks from Clusters of Co-expressed Genes
    Yang, E.
    Misra, A.
    Maguire, T. J.
    Androulakis, I. P.
    CLUSTER CHALLENGES IN BIOLOGICAL NETWORKS, 2009, : 53 - 82
  • [29] Duplications in ADHD Patients Harbour Neurobehavioural Genes That Are Co-Expressed With Genes Associated With Hyperactivity in the Mouse
    Taylor, Avigail
    Steinberg, Julia
    Webber, Caleb
    AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS, 2015, 168 (02) : 97 - 107
  • [30] Identification of co-expressed genes and immune infiltration features related to the progression of atherosclerosis
    Gu, Junqing
    Yang, Wenwei
    Lin, Shun
    Ying, Danqing
    JOURNAL OF APPLIED GENETICS, 2024, 65 (02) : 331 - 339