Identification and genetic variation among eight varieties of ginger by using random amplified polymorphic DNA markers

被引:20
|
作者
Palai, Siddharth Kumar [1 ]
Rout, Gyana Ranjan [1 ]
机构
[1] Reg Plant Resource Ctr, Plant Biotechnol Div, Bhubaneswar 751015, Orissa, India
关键词
Ginger; genetic variation; RAPD;
D O I
10.5511/plantbiotechnology.24.417
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Identification and characterization of germplasm is an important link between the conservation and utilization of plant genetic resources. The present investigation was undertaken for identification and genetic variation within eight high yielding varieties of ginger through RAPD markers. A total of 55 distinct DNA fragments ranging from 0.5-2.4 Kb were amplified by using twelve selected primers. The cluster analysis indicated that the eight varieties formed two major clusters. The first major cluster had only one variety 'S-558' with 43% similarity with other seven varieties. Second major cluster having seven varieties and divided into two minor clusters. One minor cluster had six varieties ('Jugijan', 'Turia local', 'Nadia', 'Zo-17', 'Nahfrey' and 'Gurubathan) and other having only one variety 'Surabhi'. The second minor cluster further divided into two sub-minor clusters. 'Nadia' and 'ZO-17' had 78% similarity among themselves and 70% similarity with 'Jugijan' and 'Turia local'. 'Jugijan' and 'Turia local' were having 81% similarity among themselves. However, 'Nahfrey' had 64% similarity with 'Jugijan', 'Turia local', 'Nadia' and 'ZO-17'. The present study showed the distant variation within the varieties. This investigation will help to breeders for ginger improvement program.
引用
收藏
页码:417 / 420
页数:4
相关论文
共 50 条
  • [41] Random amplified polymorphic DNA markers as a tool for apricot cultivar identification
    Hurtado, MA
    Badenes, ML
    Llácer, G
    INTERNATIONAL SYMPOSIUM ON APRICOT CULTURE, VOLS 1 AND 2, 1999, (488): : 281 - 287
  • [42] Application of random amplified polymorphic DNA markers for identification of marula genotypes
    Gutman, F
    Nerd, A
    Mizrahi, Y
    Bar-Zvi, D
    Raveh, D
    HORTSCIENCE, 1999, 34 (07) : 1256 - 1258
  • [43] Genetic variation in six Oratosquilla oratoria populations revealed by random amplified polymorphic DNA (RAPD) markers
    Liu, Haiying
    Wang, Guie
    Meng, Xiangying
    Wang, Xiuli
    2010 4TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING (ICBBE 2010), 2010,
  • [44] Blueberry Cultivar Identification Using Random Amplified Polymorphic DNA and Sequence-characterized Amplified Region Markers
    Cho, Kang Hee
    Park, Seo Jun
    Kim, Su Jin
    Kim, Se Hee
    Lee, Han Chan
    Kim, Mi Young
    Chun, Jae An
    HORTSCIENCE, 2017, 52 (11) : 1483 - 1489
  • [45] Genetic differentiation among goats using randomly amplified polymorphic DNA (RAPD) markers
    Anbarasan, K
    Sharma, AK
    Singh, RK
    Deb, SM
    Sharma, D
    JOURNAL OF APPLIED ANIMAL RESEARCH, 2001, 20 (01) : 83 - 88
  • [46] Assessment of genetic diversity among collected genotypes of Chlorophytum borivilianum using random amplified polymorphic DNA (RAPD) markers
    Dwivedi, Rashmi
    Sharma, Davendra Kumar
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (27): : 5268 - 5272
  • [47] Analysis of genetic diversity in Cider arietinum L using random amplified polymorphic DNA markers
    Singh, R
    Prasad, CD
    Singhal, V
    Randhawa, GJ
    JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY, 2002, 11 (02) : 109 - 112
  • [48] Genetic diversity in Tanzanian Arabica coffee using random amplified polymorphic DNA (RAPD) markers
    Masumbuko, LI
    Bryngelsson, T
    Mneney, EE
    Salomon, B
    HEREDITAS, 2003, 139 (01) : 56 - 63
  • [49] Analysis of Genetic Diversity in Cicer arietinum L Using Random Amplified Polymorphic DNA Markers
    Rakesh Singh
    C. Durga Prasad
    Vibha Singhal
    Gurinder Jit Randhawa
    Journal of Plant Biochemistry and Biotechnology, 2002, 11 : 109 - 112
  • [50] Testing for genetic purity in petunia and cyclamen seed using random amplified polymorphic DNA markers
    Zhang, JH
    McDonald, MB
    Sweeney, PM
    HORTSCIENCE, 1997, 32 (02) : 246 - 247