STAT3 Targets Suggest Mechanisms of Aggressive Tumorigenesis in Diffuse Large B-Cell Lymphoma

被引:31
|
作者
Hardee, Jennifer [1 ,2 ]
Ouyang, Zhengqing [1 ]
Zhang, Yuping [1 ]
Kundaje, Anshul [1 ,3 ]
Lacroute, Philippe [1 ]
Snyder, Michael [1 ]
机构
[1] Stanford Univ, Dept Genet, Sch Med, Stanford, CA 94305 USA
[2] Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA
[3] Stanford Univ, Dept Comp Sci, Sch Engn, Stanford, CA 94305 USA
来源
G3-GENES GENOMES GENETICS | 2013年 / 3卷 / 12期
基金
美国国家卫生研究院;
关键词
genomics; next-generation sequencing; cancer signaling; signal transduction; oncogenic pathways; EPSTEIN-BARR-VIRUS; TRANSCRIPTION FACTOR-BINDING; EPIDERMAL-GROWTH-FACTOR; KINASE-C-ALPHA; CHEMOKINE RECEPTOR; GENE-EXPRESSION; MEDIATED TRANSCRIPTION; TUMOR ANGIOGENESIS; NODE METASTASIS; UP-REGULATION;
D O I
10.1534/g3.113.007674
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The signal transducer and activator of transcription 3 (STAT3) is a transcription factor that, when dysregulated, becomes a powerful oncogene found in many human cancers, including diffuse large B-cell lymphoma. Diffuse large B-cell lymphoma is the most common form of non-Hodgkin's lymphoma and has two major subtypes: germinal center B-cell-like and activated B-celllike. Compared with the germinal center B-cell-like form, activated B-cell-like lymphomas respond much more poorly to current therapies and often exhibit overexpression or overactivation of STAT3. To investigate how STAT3 might contribute to this aggressive phenotype, we have integrated genome-wide studies of STAT3 DNA binding using chromatinimmunoprecipitation-sequencing with whole-transcriptome profiling using RNA-sequencing. STAT3 binding sites are present near almost a third of all genes that differ in expression between the two subtypes, and examination of the affected genes identified previously undetected and clinically significant pathways downstream of STAT3 that drive oncogenesis. Novel treatments aimed at these pathways may increase the survivability of activated B-cell-like diffuse large B-cell lymphoma.
引用
收藏
页码:2173 / 2185
页数:13
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