Automated Classification for Breast Cancer Histopathology Images: Is Stain Normalization Important?

被引:11
|
作者
Gupta, Vibha [1 ]
Singh, Apurva [2 ]
Sharma, Kartikeya [3 ]
Bhavsar, Arnav [1 ]
机构
[1] Indian Inst Technol Mandi, Mandi, Himachal Prades, India
[2] Manipal Inst Technol, Manipal, Karnataka, India
[3] Natl Inst Technol Hamirpur, Hamirpur, India
关键词
Histopathology image analysis; Stain normalization; Color-texture features; SVM; Random forest; COLOR;
D O I
10.1007/978-3-319-67543-5_16
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
Breast cancer is one of the most commonly diagnosed cancer in women worldwide. A popular diagnostic method involves histopathological microscopy imaging, which can be augmented by automated image analysis. In histopathology image analysis, stain normalization is an important procedure of color transfer between a source (reference) and the test image, that helps in addressing an important concern of stain color variation. In this work, we hypothesize that if color-texture information is well captured with suitable features using data containing sufficient color variation, it may obviate the need for stain normalization. Considering that such an image analysis study is relatively less explored, some questions are yet unresolved such as (a) How can texture and color information be effectively extracted and used for classification so as to reduce the burden on the uniform staining or stain normalization. (b) Are there good feature-classifier combinations which work consistently across all magnifications? (c) Can there be an automated way to select reference image for stain normalization? In this work, we attempt to address such questions. In the process, we compare the independent texture and color channel information with that of some more sophisticated features which consider jointly color-texture information. We have extracted above features using images with and without stain normalization to validate the above hypothesis. Moreover, we also compare different types of contemporary classification in conjunction with the above features. Based on the results of our exhaustive experimentation we provide some useful indications.
引用
收藏
页码:160 / 169
页数:10
相关论文
共 50 条
  • [1] Stain SAN: simultaneous augmentation and normalization for histopathology images
    Kim, Taebin
    Li, Yao
    Calhoun, Benjamin C.
    Thennavan, Aatish
    Carey, Lisa A.
    Symmans, W. Fraser
    Troester, Melissa A.
    Perou, Charles M.
    Marron, J. S.
    [J]. JOURNAL OF MEDICAL IMAGING, 2024, 11 (04)
  • [2] STAIN NORMALIZATION OF HISTOPATHOLOGY IMAGES USING GENERATIVE ADVERSARIAL NETWORKS
    Zanjani, Farhad Ghazvinian
    Zinger, Svitlana
    Bejnordi, Babak Ehteshami
    van der Laak, Jeroen A. W. M.
    de With, Peter H. N.
    [J]. 2018 IEEE 15TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI 2018), 2018, : 573 - 577
  • [3] Automated Segmentation of Nuclei in Breast Cancer Histopathology Images
    Paramanandam, Maqlin
    O'Byrne, Michael
    Ghosh, Bidisha
    Mammen, Joy John
    Manipadam, Marie Therese
    Thamburaj, Robinson
    Pakrashi, Vikram
    [J]. PLOS ONE, 2016, 11 (09):
  • [4] Optimizing Vision Transformers for Histopathology: Pretraining and Normalization in Breast Cancer Classification
    Baroni, Giulia Lucrezia
    Rasotto, Laura
    Roitero, Kevin
    Tulisso, Angelica
    Di Loreto, Carla
    Della Mea, Vincenzo
    [J]. JOURNAL OF IMAGING, 2024, 10 (05)
  • [5] Role of normalization of breast thermogram images and automatic classification of breast cancer
    Dayakshini Sathish
    Surekha Kamath
    Keerthana Prasad
    Rajagopal Kadavigere
    [J]. The Visual Computer, 2019, 35 : 57 - 70
  • [6] Role of normalization of breast thermogram images and automatic classification of breast cancer
    Sathish, Dayakshini
    Kamath, Surekha
    Prasad, Keerthana
    Kadavigere, Rajagopal
    [J]. VISUAL COMPUTER, 2019, 35 (01): : 57 - 70
  • [7] Classification of Breast Cancer Histopathology Images Using EfficientNet Architectures
    Kajala, Aditi
    Jaiswal, Sandeep
    [J]. ADVANCES IN INFORMATION COMMUNICATION TECHNOLOGY AND COMPUTING, AICTC 2021, 2022, 392 : 639 - 653
  • [8] A Fast and Scalable Pipeline for Stain Normalization of Whole-Slide Images in Histopathology
    Stanisavljevic, Milos
    Anghel, Andreea
    Papandreou, Nikolaos
    Andani, Sonali
    Pati, Pushpak
    Ruschoff, Jan Hendrik
    Wild, Peter
    Gabrani, Maria
    Pozidis, Haralampos
    [J]. COMPUTER VISION - ECCV 2018 WORKSHOPS, PT VI, 2019, 11134 : 424 - 436
  • [9] A stain color normalization with robust dictionary learning for breast cancer histological images processing
    Tosta, Thaina A. Azevedo
    Freitas, Andre Dias
    de Faria, Paulo Rogerio
    Neves, Leandro Alves
    Martins, Alessandro Santana
    do Nascimento, Marcelo Zanchetta
    [J]. BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2023, 85
  • [10] Color Swapping to Enhance Breast Cancer Digital Images Qualities Using Stain Normalization
    Muhimmah, Izzati
    Wijaya, Dhina Puspasari
    Indrayanti
    [J]. INTERNATIONAL CONFERENCE ON INFORMATION TECHNOLOGY AND DIGITAL APPLICATIONS, 2017, 185