Automated Segmentation of Nuclei in Breast Cancer Histopathology Images

被引:37
|
作者
Paramanandam, Maqlin [1 ]
O'Byrne, Michael [2 ]
Ghosh, Bidisha [3 ]
Mammen, Joy John [4 ]
Manipadam, Marie Therese [5 ]
Thamburaj, Robinson [1 ]
Pakrashi, Vikram [2 ]
机构
[1] Madras Christian Coll, Dept Math, Chennai, Tamil Nadu, India
[2] Univ Coll Dublin, Sch Mech & Mat Engn, Dublin, Ireland
[3] Trinity Coll Dublin, Dept Civil Struct & Environm Engn, Dublin, Ireland
[4] Christian Med Coll & Hosp, Dept Transfus Med & Immunohematol, Vellore, Tamil Nadu, India
[5] Christian Med Coll & Hosp, Dept Pathol, Vellore, Tamil Nadu, India
来源
PLOS ONE | 2016年 / 11卷 / 09期
基金
爱尔兰科学基金会;
关键词
ACTIVE CONTOUR; BOUNDARY;
D O I
10.1371/journal.pone.0162053
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The process of Nuclei detection in high-grade breast cancer images is quite challenging in the case of image processing techniques due to certain heterogeneous characteristics of cancer nuclei such as enlarged and irregularly shaped nuclei, highly coarse chromatin marginalized to the nuclei periphery and visible nucleoli. Recent reviews state that existing techniques show appreciable segmentation accuracy on breast histopathology images whose nuclei are dispersed and regular in texture and shape; however, typical cancer nuclei are often clustered and have irregular texture and shape properties. This paper proposes a novel segmentation algorithm for detecting individual nuclei from Hematoxylin and Eosin (H&E) stained breast histopathology images. This detection framework estimates a nuclei saliency map using tensor voting followed by boundary extraction of the nuclei on the saliency map using a Loopy Back Propagation (LBP) algorithm on a Markov Random Field (MRF). The method was tested on both whole-slide images and frames of breast cancer histopathology images. Experimental results demonstrate high segmentation performance with efficient precision, recall and dice-coefficient rates, upon testing high-grade breast cancer images containing several thousand nuclei. In addition to the optimal performance on the highly complex images presented in this paper, this method also gave appreciable results in comparison with two recently published methods-Wienert et al. (2012) and Veta et al. (2013), which were tested using their own datasets.
引用
收藏
页数:15
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