Falsochrobactrum shanghaiense sp. nov., isolated from paddy soil and emended description of the genus Falsochrobactrum

被引:8
|
作者
Sun, Lina [1 ,2 ]
Yao, Li [3 ]
Gao, Xinhua [1 ,4 ]
Huang, Kaihua [1 ,5 ]
Bai, Naling [1 ,6 ]
Lyu, Weiguang [1 ,2 ,6 ]
Chen, Wei [1 ,5 ]
机构
[1] Shanghai Acad Agr Sci, Ecoenvironm Protect Res Inst, Shanghai 201403, Peoples R China
[2] Shanghai Engn Res Ctr Low Carbon Agr SERCLA, Shanghai 201403, Peoples R China
[3] Yancheng Teachers Univ, Coll Marine & BioEngn, Yancheng 210095, Jiangsu, Peoples R China
[4] Shanghai Key Lab Hort Technol, Shanghai 201403, Peoples R China
[5] Environm Protect Monitoring Stn Shanghai, Shanghai 201403, Peoples R China
[6] Minist Agr, Shanghai Agr Environm & Farmland Conservat Expt S, Shanghai 201403, Peoples R China
关键词
new taxa; Falsochrobactrum; PROPOSED MINIMAL STANDARDS; NODULES; ACID;
D O I
10.1099/ijsem.0.003236
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A non-spore-forming, motile, Gram-stain-negative, short rod-shaped strain, designated HN4(T), was isolated from a paddy soil sample collected in Shanghai, China. A comparative analysis o-f 16S rRNA gene sequences showed that strain HN4(T) fell within the genus Falsochrobactrum, forming a clear cluster with the type strain of Falsochrobactrum ovis, with which it exhibited a 16S rRNA gene sequence similarity value of 98.2 %. Strain HN4(T) grew optimally at pH 7.0, 30-35 degrees C and in the presence of 1 % (w/v) NaCl. It was positive for oxidase activity. Chemotaxonomic analysis showed that strain HN4(T) contained ubiquinone-10 as the predominant respiratory quinone and possessed summed feature 8(C-18:1 omega 7c and/or C-18:1 omega 6c) and C(19:0)cyclo omega 8c as predominant fatty acids. The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine. The DNA G+C content was 56.9 mol%. Strain HN4(T) exhibited a DNA-DNA relatedness level of 18 +/- 1 % with Falsochrobactrum ovis CCM 8460(T). Based on the data obtained in this study, strain HN4(T) represents a novel species of the genus Falsochrobactrum, for which the name Falsochrobactrum shanghaiense sp. nov. is proposed. The type strain is HN4(T) (=JCM 32785(T) =CCTCC AB 2018063(T)).
引用
收藏
页码:778 / 782
页数:5
相关论文
共 50 条
  • [31] Polymorphobacter fuscus sp nov., isolated from permafrost soil, and emended description of the genus Polymorphobacter
    Jia, Li
    Feng, Xiaomin
    Zheng, Zhong
    Han, Lu
    Hou, Xiaocui
    Lu, Zhenquan
    Lv, Jie
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 : 3920 - 3925
  • [32] Sphingoaurantiacus capsulatus sp nov., isolated from mountain soil, and emended description of the genus Sphingoaurantiacus
    Tan, Yuanqing
    Wang, Yuantao
    Wang, Dan
    Wang, Gejiao
    Zheng, Shixue
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 4930 - 4935
  • [33] Amycolatopsis ultiminotia sp nov., isolated from rhizosphere soil, and emended description of the genus Amycolatopsis
    Lee, Soon Dong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 1401 - 1404
  • [34] Marmoricola solisilvae sp nov and Marmoricola terrae sp nov., isolated from soil and emended description of the genus Marmoricola
    Kim, Soo-Jin
    Lim, Jun-Muk
    Hamada, Moriyuki
    Ahn, Jae-Hyung
    Weon, Hang-Yeon
    Suzuki, Ken-ichiro
    Ahn, Tae-Young
    Kwon, Soon-Wo
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 : 1825 - 1830
  • [35] Hamadaea flava sp nov., isolated from a soil sample and emended description of the genus Hamadaea
    Chu, Xiao
    Li, Shuai
    Chen, Wei
    Asem, Mipeshwaree Devi
    Duan, Yan-Qing
    Nie, Guo-Xing
    Hozzein, Wael N.
    Zhi, Xiao-Yang
    Li, Wen-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 1818 - 1822
  • [36] Spirosoma oryzae sp nov., isolated from rice soil and emended description of the genus Spirosoma
    Ahn, Jae-Hyung
    Weon, Hang-Yeon
    Kim, Soo-Jin
    Hong, Seung-Beom
    Seok, Soon-Ja
    Kwon, Soon-Wo
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 3230 - 3234
  • [37] Aestuariimicrobium soli sp nov., isolated from farmland soil, and emended description of the genus Aestuariimicrobium
    Chen, Ling-Ling
    Chen, Feng
    Zhao, Hua-Zhu
    Feng, Zhao-Zhong
    Zhang, Hao
    Huang, Xing
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (10) : 3296 - 3300
  • [38] Phenylobacterium muchangponense sp nov., isolated from beach soil, and emended description of the genus Phenylobacterium
    Oh, Yong-Sik
    Roh, Dong-Hyun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 977 - 983
  • [39] Pedobacter yulinensis sp nov., isolated from sandy soil, and emended description of the genus Pedobacter
    Wei, Yahong
    Wang, Baodan
    Zhang, Limei
    Zhang, Jianguo
    Chen, Shaolin
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (08) : 2523 - 2529
  • [40] Actinocatenispora rupis sp nov., isolated from cliff soil, and emended description of the genus Actinocatenispora
    Seo, Seong Hae
    Lee, Soon Dong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 3078 - 3082