Database of host-pathogen and related species interactions, and their global distribution

被引:85
|
作者
Wardeh, Maya [1 ]
Risley, Claire [1 ,2 ]
McIntyre, Marie Kirsty [1 ]
Setzkorn, Christian [1 ]
Baylis, Matthew [1 ,3 ]
机构
[1] Univ Liverpool, Dept Epidemiol & Populat Hlth, Inst Infect & Global Hlth, Leahurst Campus,Chester High Rd, Neston CH64 7TE, Cheshire, England
[2] Aberystwyth Univ, Inst Biol & Environm & Rural Sci, Aberystwyth SY23 3DA, Dyfed, Wales
[3] Univ Liverpool, Hlth Protect Res Unit Emerging & Zoonot Infect, Neston CH64 7TE, Cheshire, England
基金
英国生物技术与生命科学研究理事会;
关键词
SYSTEMATIC ANALYSIS; INFECTIOUS-DISEASE; BURDEN; RISK;
D O I
10.1038/sdata.2015.49
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Interactions between species, particularly where one is likely to be a pathogen of the other, as well as the geographical distribution of species, have been systematically extracted from various web-based, free-access sources, and assembled with the accompanying evidence into a single database. The database attempts to answer questions such as what are all the pathogens of a host, and what are all the hosts of a pathogen, what are all the countries where a pathogen was found, and what are all the pathogens found in a country. Two datasets were extracted from the database, focussing on species interactions and species distribution, based on evidence published between 1950-2012. The quality of their evidence was checked and verified against well-known, alternative, datasets of pathogens infecting humans, domestic animals and wild mammals. The presented datasets provide a valuable resource for researchers of infectious diseases of humans and animals, including zoonoses.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] Lipidomics of host-pathogen interactions
    Wenk, Markus R.
    FEBS LETTERS, 2006, 580 (23) : 5541 - 5551
  • [22] Host-pathogen interactions in the cornea
    Takashi Suzuki
    Ai Yamada
    Michael S. Gilmore
    Japanese Journal of Ophthalmology, 2010, 54 : 191 - 193
  • [23] Host-pathogen interactions in Drosophila
    Dionne, Marc S.
    Schneider, David S.
    DISEASE MODELS & MECHANISMS, 2008, 1 (01) : 67 - 68
  • [24] Genomics of host-pathogen interactions
    Rausell, Antonio
    Telenti, Amalio
    CURRENT OPINION IN IMMUNOLOGY, 2014, 30 : 32 - 38
  • [25] Dysregulation of Host-Pathogen Interactions in Sepsis: Host-Related Factors
    Joosten, Sebastiaan C. M.
    Wiersinga, Willem J.
    van der Poll, Tom
    SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE, 2024, 45 (04) : 469 - 478
  • [26] HOST-PATHOGEN INTERACTIONS - SUMMARY
    BASEMAN, JB
    REVIEWS OF INFECTIOUS DISEASES, 1982, 4 : S200 - S200
  • [27] Senescence and Host-Pathogen Interactions
    Humphreys, Daniel
    ElGhazaly, Mohamed
    Frisan, Teresa
    CELLS, 2020, 9 (07)
  • [28] Functional genomics of host-pathogen interactions in species of veterinary importance
    Glass, EJ
    Coussens, PM
    VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY, 2005, 105 (3-4) : 173 - 174
  • [29] On the principle of host evolution in host-pathogen interactions
    Martcheva, Maia
    Tuncer, Necibe
    Kim, Yena
    JOURNAL OF BIOLOGICAL DYNAMICS, 2017, 11 (01) : 102 - 119
  • [30] MorCVD: A Unified Database for Host-Pathogen Protein-Protein Interactions of Cardiovascular Diseases Related to Microbes
    Singh, Nirupma
    Bhatia, Venugopal
    Singh, Shubham
    Bhatnagar, Sonika
    SCIENTIFIC REPORTS, 2019, 9 (1)