On-line graph mining and visualization of protein-ligand interactome

被引：0
|
作者：
Ng, Clara [1 ]
Xie, Lei [1 ,2 ]
机构：
[1] CUNY, Dept Comp Sci, New York, NY 10021 USA
[2] CUNY, Grad Ctr, New York, NY USA
来源：
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY | 2013年 / 245卷
关键词：
D O I：
暂无
中图分类号：
O6 [化学];
学科分类号：
0703 ;
摘要：
16-CINF
引用
收藏
页数：1
相关论文
共 50 条
  • [31] Protein-ligand docking
    Bottegoni, Giovanni
    FRONTIERS IN BIOSCIENCE-LANDMARK, 2011, 16 : 2289 - 2306
  • [32] Protein-Ligand Interactions
    Brecker, Lothar
    Husa, Markus
    NACHRICHTEN AUS DER CHEMIE, 2013, 61 (02) : 153 - 155
  • [33] Innovative Mamba and graph transformer framework for superior protein-ligand affinity prediction
    Han, Kaitai
    Shi, Chaojing
    Wang, Zijun
    Liu, Wu
    Li, Zhenxing
    Wang, Zhenghui
    Lei, Lixin
    Dai, Ruoyan
    Wang, Mengqiu
    Zhang, Zhiwei
    Guo, Qianjin
    MICROCHEMICAL JOURNAL, 2024, 206
  • [34] Protein-ligand binding affinity prediction model based on graph attention network
    Yuan, Hong
    Huang, Jing
    Li, Jin
    MATHEMATICAL BIOSCIENCES AND ENGINEERING, 2021, 18 (06) : 9148 - 9162
  • [35] GraphscoreDTA: optimized graph neural network for protein-ligand binding affinity prediction
    Wang, Kaili
    Zhou, Renyi
    Tang, Jing
    Li, Min
    BIOINFORMATICS, 2023, 39 (06)
  • [36] A Point Cloud Graph Neural Network for Protein-Ligand Binding Site Prediction
    Zhao, Yanpeng
    He, Song
    Xing, Yuting
    Li, Mengfan
    Cao, Yang
    Wang, Xuanze
    Zhao, Dongsheng
    Bo, Xiaochen
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (17)
  • [37] GraphPLBR: Protein-Ligand Binding Residue Prediction With Deep Graph Convolution Network
    Wang, Wei
    Sun, Bin
    Yu, MengXue
    Wu, ShiYu
    Liu, Dong
    Zhang, HongJun
    Zhou, Yun
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 20 (03) : 2223 - 2232
  • [38] Shedding light on protein-ligand binding by graph theory: The topological nature of allostery
    De Ruvo, Micol
    Giuliani, Alessandro
    Paci, Paola
    Santoni, Daniele
    Di Paola, Luisa
    BIOPHYSICAL CHEMISTRY, 2012, 165 : 21 - 29
  • [39] PROLIX: Rapid Mining of Protein-Ligand Interactions in Large Crystal Structure Databases
    Weisel, Martin
    Bitter, Hans-Marcus
    Diederich, Francois
    So, W. Venus
    Kondru, Rama
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2012, 52 (06) : 1450 - 1461
  • [40] CALI: A novel visual model for frequent pattern mining in protein-ligand graphs
    Susana Medina, G.
    Fassio, Alexandre V.
    Silveira, Sabrina de A.
    da Silveira, Carlos H.
    de Melo-Minardi, Raquel C.
    2017 IEEE 17TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING (BIBE), 2017, : 352 - 358
12345