Structure-based Virtual Screening for the Identification of High-affinity Small Molecule Towards STAT3 for the Clinical Treatment of Osteosarcoma

被引:25
|
作者
Khandelwal, Ravina [1 ]
Chauhan, Aashish Pratap Singh [1 ]
Bilawat, Swarnima [1 ]
Gandhe, Aishwarya [1 ]
Hussain, Tajamul [4 ,5 ]
Hood, Elizabeth Anne [3 ]
Nayarisseri, Anuraj [1 ,2 ,6 ]
Singh, Sanjeev Kumar [6 ]
机构
[1] Eminent Biosci, In Silico Res Lab, Indore 452010, Madhya Pradesh, India
[2] LeGene Biosci Pvt Ltd, Bioinformat Res Lab, Indore 452010, Madhya Pradesh, India
[3] Univ Missouri, Chem & Biochem Dept, St Louis, MO 63121 USA
[4] King Saud Univ, Coll Sci, Ctr Excellence Biotechnol Res, Riyadh, Saudi Arabia
[5] King Saud Univ, Biochem Dept, Coll Sci, Res Chair Biomed Applicat Nanomat, Riyadh, Saudi Arabia
[6] Alagappa Univ, Dept Bioinformat, Comp Aided Drug Designing & Mol Modeling Lab, Karaikkudi 630003, Tamil Nadu, India
关键词
STAT3; Osteosarcoma; Molecular docking; Virtual screening; ADMET; Cancer; SIGNALING PATHWAY; ANTITUMOR-ACTIVITY; DOWN-REGULATION; INHIBITION; CELLS; ACTIVATION; APOPTOSIS; DOCKING; CANCER; EXERTS;
D O I
10.2174/1568026618666181115092001
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Background: According to DCEG investigation, the compared results of the osteosarcoma incidences in different continents, reported it to be the most diagnosed in adolescents and adults above 60 yrs. old. Less than 15% of patients get cured with surgery alone but the addition of chemotherapy to the treatment increases the survival rate of patient by 58%-76%. Surgical resection and aggressive chemotherapy protocols are effective to an extent but have failed to improve the 5-year overall survival rate. Indubitably, new drugs and new therapeutic targets are required to improve the outcome as well as to diminish the long-term toxicities associated with the current benchmark of treatment. STAT3 appears to be an important mediator of chemoresistance in osteosarcoma. Results: Experimental evidence clearly demonstrate the disruption of STAT3 signaling which inhibits the survival and proliferation of osteosarcoma and decreases the growth of disease. This prevailing study approach is by molecular docking, virtual screening to elucidate inhibitor with superior affinity against STAT3 to have a cautious pharma profile. To rectify the best-established drug with high affinity, Mol dock algorithm is executed. The compound Sorafenib (Pub CID 216239) having high-affinity scores is subjected to another similarity search to retrieve the drugs with similar properties. The virtual screened compound with PubChem CID-44815014 as per BOILED-Egg plot reveals its high affinity. Conclusion: Comparative study and ADMET study both showed the compounds to have equivalent properties, whereas interestingly the virtual screened compound having PubChem CID-44815014 is seen to have the lowest rerank score. These drugs are identified to have high potential to act as STAT3 inhibitors and probably can be considered for further studies in wet lab analysis.
引用
收藏
页码:2511 / 2526
页数:16
相关论文
共 50 条
  • [41] Structure-based virtual screening identifies an 8-hydroxyquinoline as a small molecule GLI1 inhibitor
    Dash, Radha Charan
    Wen, Jiachen
    Zaino, Angela M.
    Morel, Shana R.
    Chau, Lianne Q.
    Wechsler-Reya, Robert J.
    Hadden, M. Kyle
    MOLECULAR THERAPY-ONCOLYTICS, 2021, 20 : 265 - 276
  • [42] Structure-based virtual screening identifies a small-molecule inhibitor of the profilin 1-actin interaction
    Gau, David
    Lewis, Taber
    McDermott, Lee
    Wipf, Peter
    Koes, David
    Roy, Partha
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2018, 293 (07) : 2606 - 2616
  • [43] Structure-based virtual screening of small-molecule antagonists of platelet integrin αIIbβ3 that do not prime the receptor to bind ligand
    Ana Negri
    Jihong Li
    Sarasija Naini
    Barry S. Coller
    Marta Filizola
    Journal of Computer-Aided Molecular Design, 2012, 26 : 1005 - 1015
  • [44] Structure-based virtual screening of small-molecule antagonists of platelet integrin αIIbβ3 that do not prime the receptor to bind ligand
    Negri, Ana
    Li, Jihong
    Naini, Sarasija
    Coller, Barry S.
    Filizola, Marta
    JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2012, 26 (09) : 1005 - 1015
  • [45] High-affinity azetidine-based small-molecules as a new class of direct inhibitors of STAT3 activity and breast cancer phenotype.
    Yue, Peibin
    Lopez-Tapia, Francisco
    Zhu, Yinsong
    Brotherton-Pleiss, Christine
    Fu, Wenzhen
    Alonso-Valenteen, Felix
    Mikhael, Simoun
    Medina-Kauwe, Lali
    Tius, Marcus
    Turkson, James
    CANCER RESEARCH, 2021, 81 (13)
  • [46] Novel small molecule inhibitors targeting the "switch region" of bacterial RNAP: Structure-based optimization of a virtual screening hit
    Sahner, J. Henning
    Groh, Matthias
    Negri, Matthias
    Haupenthal, Joerg
    Hartmann, Rolf W.
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2013, 65 : 223 - 231
  • [47] Discovery of a Novel Small Molecule Inhibitor Targeting the Frataxin/Ubiquitin Interaction via Structure-Based Virtual Screening and Bioassays
    Lavecchia, Antonio
    Di Giovanni, Carmen
    Cerchia, Carmen
    Russo, Annapina
    Russo, Giulia
    Novellino, Ettore
    JOURNAL OF MEDICINAL CHEMISTRY, 2013, 56 (07) : 2861 - 2873
  • [48] Hit identification of novel small molecules interfering with MALAT1 triplex by a structure-based virtual screening
    Rocca, Roberta
    Polera, Nicoletta
    Juli, Giada
    Grillone, Katia
    Maruca, Annalisa
    Martino, Maria Teresa Di
    Artese, Anna
    Amato, Jussara
    Pagano, Bruno
    Randazzo, Antonio
    Tagliaferri, Pietrosandro
    Tassone, Pierfrancesco
    Alcaro, Stefano
    ARCHIV DER PHARMAZIE, 2023, 356 (08)
  • [49] Identification of novel inhibitors of glucose transporter 3 (GLUT3) through structure-based virtual screening
    Zhang, Sixue
    Libby, Catherin
    Augelli-Szafran, Corinne
    Hjelmeland, Anita
    Zhang, Wei
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2017, 254
  • [50] Structure-Based Virtual Screening, Molecular Docking, Molecular Dynamics Simulation of EGFR for the Clinical Treatment of Glioblastoma
    Anushka Bhrdwaj
    Mohnad Abdalla
    Aditi Pande
    Maddala Madhavi
    Ishita Chopra
    Lovely Soni
    Natchimuthu Vijayakumar
    Umesh Panwar
    Mohd. Aqueel Khan
    Leena Prajapati
    Deepika Gujrati
    Pranoti Belapurkar
    Sarah Albogami
    Tajamul Hussain
    Chandrabose Selvaraj
    Anuraj Nayarisseri
    Sanjeev Kumar Singh
    Applied Biochemistry and Biotechnology, 2023, 195 : 5094 - 5119