Insights into the mechanism of X-ray-induced disulfide-bond cleavage in lysozyme crystals based on EPR, optical absorption and X-ray diffraction studies

被引:53
|
作者
Sutton, Kristin A. [1 ]
Black, Paul J. [2 ]
Mercer, Kermit R. [2 ]
Garman, Elspeth F. [3 ]
Owen, Robin L. [4 ]
Snell, Edward H. [1 ,5 ]
Bernhard, William A. [2 ]
机构
[1] Hauptman Woodward Med Res Inst, Buffalo, NY 14086 USA
[2] Univ Rochester, Med Ctr, Rochester, NY 14642 USA
[3] Univ Oxford, Dept Biochem, Lab Mol Biophys, Oxford OX1 3QU, Oxon, England
[4] Diamond Light Source, Didcot OX11 0DE, Oxon, England
[5] SUNY Buffalo, Dept Biol Struct, Sch Med, Buffalo, NY 14203 USA
基金
美国国家卫生研究院;
关键词
RADIATION-DAMAGE; MACROMOLECULAR CRYSTALS; PROTEIN CRYSTALS; DATA-COLLECTION; RADICALS; DEPENDENCE; REDUCTION; ICE; IRRADIATION; SYSTEM;
D O I
10.1107/S0907444913022117
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Electron paramagnetic resonance (EPR) and online UV-visible absorption microspectrophotometry with X-ray crystallography have been used in a complementary manner to follow X-ray-induced disulfide-bond cleavage. Online UV-visible spectroscopy showed that upon X-irradiation, disulfide radicalization appeared to saturate at an absorbed dose of approximately 0.5-0.8 MGy, in contrast to the saturating dose of similar to 0.2 MGy observed using EPR at much lower dose rates. The observations suggest that a multi-track model involving product formation owing to the interaction of two separate tracks is a valid model for radiation damage in protein crystals. The saturation levels are remarkably consistent given the widely different experimental parameters and the range of total absorbed doses studied. The results indicate that even at the lowest doses used for structural investigations disulfide bonds are already radicalized. Multi-track considerations offer the first step in a comprehensive model of radiation damage that could potentially lead to a combined computational and experimental approach to identifying when damage is likely to be present, to quantitate it and to provide the ability to recover the native unperturbed structure.
引用
收藏
页码:2381 / 2394
页数:14
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