Noncoding RNAs Associated with PPARs in Etiology of MAFLD as a Novel Approach for Therapeutics Targets

被引:2
|
作者
Kazeminasab, Fatemeh [1 ]
Baharlooie, Maryam [2 ]
Ghaedi, Kamran [2 ]
机构
[1] Univ Kashan, Fac Humanities, Dept Phys Educ & Sport Sci, Ravand St, Kashan 8731735153, Iran
[2] Univ Isfahan, Fac Biol Sci & Technol, Dept Cell & Mol Biol & Microbiol, Hezar Jerib Ave,Azadi Sq, Esfahan 8174673441, Iran
关键词
NONALCOHOLIC FATTY LIVER; HEPATIC LIPOGENESIS; INSULIN-RESISTANCE; DISEASE; LNCRNA; NAFLD; STEATOHEPATITIS; STEATOSIS; FIBROSIS; GAMMA;
D O I
10.1155/2022/6161694
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Background. Metabolic associated fatty liver disease (MAFLD) is a complex disease that results from the accumulation of fat in the liver. MAFLD is directly associated with obesity, insulin resistance, diabetes, and metabolic syndrome. PPAR gamma ligands, including pioglitazone, are also used in the management of this disease. Noncoding RNAs play a critical role in various diseases such as diabetes, obesity, and liver diseases including MAFLD. However, there is no adequate knowledge about the translation of using these ncRNAs to the clinics, particularly in MAFLD conditions. The aim of this study was to identify ncRNAs in the etiology of MAFLD as a novel approach to the therapeutic targets. Methods. We collected human and mouse MAFLD gene expression datasets available in GEO. We performed pathway enrichment analysis of total mRNAs based on KEGG repository data to screen the most potential pathways in the liver of MAFLD human subjects and mice model, and analyzed pathway interconnections via ClueGO. Finally, we screened disease causality of the MAFLD ncRNAs, which were associated with PPARs, and then discussed the role of revealed ncRNAs in PPAR signaling and MAFLD. Results. We found 127 ncRNAs in MAFLD which 25 out of them were strongly validated before for regulation of PPARs. With a polypharmacology approach, we screened 51 ncRNAs which were causal to a subset of diseases related to MAFLD. Conclusion. This study revealed a subset of ncRNAs that could help in more clear and guided designation of preclinical and clinical studies to verify the therapeutic application of the revealed ncRNAs by manipulating the PPARs molecular mechanism in MAFLD.
引用
收藏
页数:13
相关论文
共 39 条
  • [31] Identification of Novel Long Noncoding RNAs Associated with TGF-β/Smad3-Mediated Renal Inflammation and Fibrosis by RNA Sequencing
    Zhou, Qin
    Chung, Arthur C. K.
    Huang, Xiao R.
    Dong, Yuan
    Yu, Xueqing
    Lan, Hui Y.
    AMERICAN JOURNAL OF PATHOLOGY, 2014, 184 (02): : 409 - 417
  • [32] Long non-coding RNAs act as novel therapeutic targets by regulating molecular networks associated with ischemic stroke
    Manikandan, Palanisamy
    Vijayakumar, Rajendran
    Alshehri, Bader
    Senthilkumar, Subramanian
    Al-Aboody, Mohammad Saleh
    Haribaskar, R.
    Veluchamy, Alaguraj
    JOURNAL OF KING SAUD UNIVERSITY SCIENCE, 2022, 34 (05)
  • [33] Transcriptome-wide expression profiling of long noncoding and small nucleolar RNAs in head and neck squamous cell carcinomas identifies novel transcripts associated with survival
    Honda, Thomas K.
    Zou, Angela
    Yu, Vicky
    Zheng, Hao
    Kuo, Selena
    Saad, Maarouf
    Xuan, Yinan
    Singh, Pranav
    Wang-Rodriguez, Jessica
    Ongkeko, Weg M.
    CANCER RESEARCH, 2015, 75
  • [34] Sex-Differential Responses of Tumor Promotion-Associated Genes and Dysregulation of Novel Long Noncoding RNAs in Constitutive Androstane Receptor-Activated Mouse Liver
    Lodato, Nicholas J.
    Melia, Tisha
    Rampersaud, Andy
    Waxman, David J.
    TOXICOLOGICAL SCIENCES, 2017, 159 (01) : 25 - 41
  • [35] Two novel DXZ4-associated long noncoding RNAs show developmental changes in expression coincident with heterochromatin formation at the human (Homo sapiens) macrosatellite repeat
    Figueroa, Debbie M.
    Darrow, Emily M.
    Chadwick, Brian P.
    CHROMOSOME RESEARCH, 2015, 23 (04) : 733 - 752
  • [36] Two novel DXZ4-associated long noncoding RNAs show developmental changes in expression coincident with heterochromatin formation at the human (Homo sapiens) macrosatellite repeat
    Debbie M. Figueroa
    Emily M. Darrow
    Brian P. Chadwick
    Chromosome Research, 2015, 23 : 733 - 752
  • [37] A single approach, multiple insights: Harnessing spatial transcriptomics and proteomics to identify novel therapeutic targets of alcohol-associated hepatitis
    Ham, Eugene
    Keating, Claudia R.
    Qiu, Wei
    ALCOHOL-CLINICAL AND EXPERIMENTAL RESEARCH, 2025,
  • [38] Discerning novel drug targets for treating Mycobacterium auium ss. paratuberculosis-associated autoimmune disorders: an in silico approach
    Garg, Anjali
    Singhal, Neelja
    Kumar, Manish
    BRIEFINGS IN BIOINFORMATICS, 2021, 22 (03)
  • [39] Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis
    Samorodnitsky, Sarah
    Kruk, Monica
    Lock, Eric F.
    Kunisaki, Ken M.
    Morris, Alison
    Leung, Janice M.
    Weise, Danielle
    Mehta, Subina
    Parker, Laurie L.
    Jagtap, Pratik D.
    Griffin, Timothy J.
    Wendt, Chris H.
    RESPIRATORY RESEARCH, 2024, 25 (01)