Ab initio quantum mechanical charge field (QMCF) molecular dynamics: a QM/MM-MD procedure for accurate simulations of ions and complexes

被引:185
|
作者
Rode, BM [1 ]
Hofer, TS [1 ]
Randolf, BR [1 ]
Schwenk, CF [1 ]
Xenides, D [1 ]
Vchirawongkwin, V [1 ]
机构
[1] Univ Innsbruck, Theoret Chem Div, Inst Gen Inorgan & Theoret Chem, A-6020 Innsbruck, Austria
关键词
D O I
10.1007/s00214-005-0049-1
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new formalism for quantum mechanical / molecular mechanical (QM/MM) dynamics of chemical species in solution has been developed, which does not require the construction of any other potential functions except those for solvent-solvent interactions, maintains all the advantages of large simulation boxes and ensures the accuracy of ab initio quantum mechanics for all forces acting in the chemically most relevant region. Interactions between solute and more distant solvent molecules are incorporated by a dynamically adjusted force field corresponding to the actual molecular configuration of the simulated system and charges derived from the electron distribution in the solvate. The new formalism has been tested with some examples of hydrated ions, for which accurate conventional ab initio QM/MM simulations have been previously performed, and the comparison shows equivalence and in some aspects superiority of the new method. As this simulation procedure does not require any tedious construction of two-and three-body interaction potentials inherent to conventional QM/MM approaches, it opens the straightforward access to ab initio molecular dynamics simulations of any kind of solutes, such as metal complexes and other composite species in solution.
引用
收藏
页码:77 / 85
页数:9
相关论文
共 50 条
  • [31] Gold(I) and Mercury(II)-Isoelectronic Ions with Strongly Different Chemistry: Ab Initio QMCF Molecular Dynamics Simulations of Their Hydration Structure
    Lichtenberger, Philipp M.
    Ellmerer, Andreas E.
    Hofer, T. S.
    Randlf, B. R.
    Rode, B. M.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (19): : 5993 - 5998
  • [32] Hydration of iron-porphyrins: ab initio quantum mechanical charge field molecular dynamics simulation study
    Moin, Syed Tarique
    Hofer, Thomas S.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2017, 19 (45) : 30822 - 30833
  • [33] Al(III) hydration revisited. An ab initio quantum mechanical charge field molecular dynamics study
    Hofer, Thomas S.
    Randolf, Bernhard R.
    Rode, Bernd M.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2008, 112 (37): : 11726 - 11733
  • [34] Combining quantum wavepacket ab initio molecular dynamics with QM/MM and QM/QM techniques:: Implementation blending ONIOM and empirical valence bond theory
    Sumner, Isaiah
    Iyengar, Srinivasan S.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2008, 129 (05):
  • [35] Increasing the Time Step with Mass Scaling in Born-Oppenheimer Ab Initio QM/MM Molecular Dynamics Simulations
    Zheng, Han
    Wang, Shenglong
    Zhang, Yingkai
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 2009, 30 (16) : 2706 - 2711
  • [36] COMP 29-Born-Oppenheimer molecular dynamics simulations of enzyme catalysis with ab initio QM/MM methods
    Zhang, Yingkai
    Wang, Shenglong
    Hu, Po
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 235
  • [37] Catalytic Reaction Mechanism of Acetylcholinesterase Determined by Born-Oppenheimer Ab Initio QM/MM Molecular Dynamics Simulations
    Zhou, Yanzi
    Wang, Shenglong
    Zhang, Yingkai
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (26): : 8817 - 8825
  • [38] Extended ab initio quantum mechanical/molecular mechanical molecular dynamics simulations of hydrated Cu2+
    Schwenk, CF
    Rode, BM
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (18): : 9523 - 9531
  • [39] Investigation of the preferential solvation and dynamical properties of Cu+ in 18.6% aqueous ammonia solution using ab initio quantum mechanical charge field (QMCF) molecular dynamics and NBO analysis
    Saputri, Wahyu Dita
    Hidayat, Yuniawan
    Wijaya, Karna
    Pranowo, Harno Dwi
    Hofer, Thomas S.
    [J]. JOURNAL OF MOLECULAR LIQUIDS, 2019, 275 : 859 - 866
  • [40] Dynamics of ligand exchange mechanism at Cu(II) in water: An ab initio quantum mechanical charge field molecular dynamics study with extended quantum mechanical region
    Moin, Syed Tarique
    Hofer, Thomas S.
    Weiss, Alexander K. H.
    Rode, Bernd M.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2013, 139 (01):