Translation at the single-molecule level

被引:92
|
作者
Marshall, R. Andrew [1 ]
Aitken, Colin Echeverria [2 ]
Dorywalska, Magdalena [3 ]
Puglisi, Joseph D. [3 ,4 ]
机构
[1] Stanford Univ, Sch Med, Dept Chem, Stanford, CA 94305 USA
[2] Stanford Univ, Sch Med, Biophys Program, Stanford, CA 94305 USA
[3] Stanford Univ, Sch Med, Dept Biol Struct, Stanford, CA 94305 USA
[4] Stanford Univ, Sch Med, Stanford Magnet Resonance Lab, Stanford, CA 94305 USA
关键词
FRET; hybrid state; optical tweezers; protein synthesis; ribosome; tRNA selection;
D O I
10.1146/annurev.biochem.77.070606.101431
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Decades of studies have established translation as a multistep, multicomponent process that requires intricate communication to achieve high levels of speed, accuracy, and regulation. A crucial next step in understanding translation is to reveal the functional significance of the large-scale motions implied by static ribosome structures. This requires determining the trajectories, timescales, forces, and biochemical signals that underlie these dynamic conformational changes. Single-molecule methods have emerged as important tools for the characterization of motion in complex systems, including translation. In this review, we chronicle the key discoveries in this nascent field, which have demonstrated the power and promise of single-molecule techniques in the study of translation.
引用
收藏
页码:177 / 203
页数:27
相关论文
共 50 条
  • [41] DNA polymerase activity at the single-molecule level
    Gill, Joshua P.
    Wang, Jun
    Millar, David P.
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2011, 39 : 595 - 599
  • [42] Inferring diffusion in single live cells at the single-molecule level
    Robson, Alex
    Burrage, Kevin
    Leake, Mark C.
    PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2013, 368 (1611)
  • [43] Verification of Single-Molecule Imaging and Single-Molecule Measurements
    Ishijima, Akihiko
    Fukuoka, Hajime
    Inoue, Yuichi
    JOURNAL OF ROBOTICS AND MECHATRONICS, 2010, 22 (05) : 568 - 578
  • [44] Combining single-molecule manipulation and single-molecule detection
    Cordova, Juan Carlos
    Das, Dibyendu Kumar
    Manning, Harris W.
    Lang, Matthew J.
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2014, 28 : 142 - 148
  • [45] Live-Cell Single-Molecule Tracking of the Translation Machinery
    Volkov, Ivan L.
    Metelev, Mikhail
    Lundin, Erik
    Aguirre, Javier
    Johansson, Magnus
    BIOPHYSICAL JOURNAL, 2021, 120 (03) : 218A - 218A
  • [46] Single-Molecule Metal-Induced Energy Transfer (smMIET): Resolving Nanometer Distances at the Single-Molecule Level
    Karedla, Narain
    Chizhik, Alexey I.
    Gregor, Ingo
    Chizhik, Anna M.
    Schulz, Olaf
    Enderlein, Joerg
    CHEMPHYSCHEM, 2014, 15 (04) : 705 - 711
  • [47] Single-molecule Fluorescence Microscopy Study Of The Ribosome Translation Process
    Dulin, David
    Perronet, Karen
    Westbrook, Nathalie
    Bouyer, Philippe
    Soler, Nicolas
    Fourmy, Dominique
    Yoshizawa, Satoko
    BIOPHYSICAL JOURNAL, 2009, 96 (03) : 579A - 580A
  • [48] Simultaneous Measurement of SUMOylation using SNAP/CLIP-Tag-Mediated Translation at the Single-Molecule Level
    Yang, Yong
    Zhang, Chun-yang
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2013, 52 (02) : 691 - 694
  • [49] DNA molecule manipulation by motor proteins for analysis at the single-molecule level
    Ryuji Yokokawa
    Junichi Miwa
    Mehmet Cagatay Tarhan
    Hiroyuki Fujita
    Masahiro Kasahara
    Analytical and Bioanalytical Chemistry, 2008, 391
  • [50] DNA molecule manipulation by motor proteins for analysis at the single-molecule level
    Yokokawa, Ryuji
    Miwa, Junichi
    Tarhan, Mehmet Cagatay
    Fujita, Hiroyuki
    Kasahara, Masahiro
    ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2008, 391 (08) : 2735 - 2743