Sample Preparation Induced Artifacts in Cryo-Electron Tomographs

被引:2
|
作者
Plevka, Pavel [1 ]
Battisti, Anthony J. [1 ]
Winkler, Dennis C. [2 ]
Tars, Kaspars [3 ]
Holdaway, Heather A. [1 ]
Bator, Carol M. [1 ]
Rossmann, Michael G. [1 ]
机构
[1] Purdue Univ, Dept Biol Sci, W Lafayette, IN 47907 USA
[2] NIAMSD, Struct Biol Res Lab, NIH, Bethesda, MD 20892 USA
[3] Latvian Biomed Res & Study Ctr, LV-1067 Riga, Latvia
基金
美国国家卫生研究院;
关键词
cryo-EM; microscopy; ice-vacuum interface; artifacts; virus; tomography; VIRUS; RECONSTRUCTIONS;
D O I
10.1017/S1431927612001298
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
We investigated the effects of sample preparation and of the exposure to an electron beam on particles in cryo-electron tomographs. Various virus particles with icosahedral symmetry were examined, allowing a comparison of symmetrically related components that should be identical in structure but might be affected differently by these imaging artifacts. Comparison of tomographic reconstructions with previously determined structures established by an independent method showed that neither freezing nor electron beam exposure produced a significant amount of shrinkage along the z axis (thickness). However, we observed damage to regions of the particles located close to the surface of the vitreous ice.
引用
收藏
页码:1043 / 1048
页数:6
相关论文
共 50 条
  • [21] CRYO-ELECTRON MICROSCOPY OF VIRUSES
    ADRIAN, M
    DUBOCHET, J
    LEPAULT, J
    MCDOWALL, AW
    NATURE, 1984, 308 (5954) : 32 - 36
  • [22] Quantitative Cryo-Electron Tomography
    Navarro, Paula P.
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
  • [23] Artifacts in sample preparation of transmission electron microscopy
    Kim, YW
    METALS AND MATERIALS INTERNATIONAL, 2001, 7 (05): : 499 - 504
  • [24] Artifacts in sample preparation of transmission electron microscopy
    Young-Woon Kim
    Metals and Materials International, 2001, 7 : 499 - 504
  • [25] Automated cryo-electron microscopy
    Potter, CS
    Fellmann, D
    Milligan, RA
    Pulokas, J
    Suloway, C
    Zhu, Y
    Carragher, B
    2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS, 2002, : 741 - 744
  • [26] Cryo-electron Microscopy Specimen Preparation By Means Of a Focused Ion Beam
    Rubino, Stefano
    Melin, Petter
    Spellward, Paul
    Leifer, Klaus
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2014, (89):
  • [27] Nanoscale characterization of the biomolecular corona by cryo-electron microscopy, cryo-electron tomography, and image simulation
    Sheibani, Sara
    Basu, Kaustuv
    Farnudi, Ali
    Ashkarran, Aliakbar
    Ichikawa, Muneyoshi
    Presley, John F.
    Bui, Khanh Huy
    Ejtehadi, Mohammad Reza
    Vali, Hojatollah
    Mahmoudi, Morteza
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [28] Nanoscale characterization of the biomolecular corona by cryo-electron microscopy, cryo-electron tomography, and image simulation
    Sara Sheibani
    Kaustuv Basu
    Ali Farnudi
    Aliakbar Ashkarran
    Muneyoshi Ichikawa
    John F. Presley
    Khanh Huy Bui
    Mohammad Reza Ejtehadi
    Hojatollah Vali
    Morteza Mahmoudi
    Nature Communications, 12
  • [29] Fast Grid Preparation for Time-Resolved Cryo-Electron Microscopy
    Klebl, David P.
    Sobott, Frank
    White, Howard D.
    Muench, Stephen P.
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2021, (177):
  • [30] Preparation of Doublet Microtubule Fraction for Single Particle Cryo-electron Microscopy
    Black, Corbin
    Dai, Daniel Chen
    Peri, Katya
    Ichikawa, Muneyoshi
    Bui, Khanh Huy
    BIO-PROTOCOL, 2021, 11 (11):