Discovery of Selective Inhibitors of Imidazoleglycerol-Phosphate Dehydratase from Mycobacterium tuberculosis by Virtual Screening

被引:3
|
作者
Podshivalov, D. D. [1 ,2 ,3 ]
Mandzhieva, Yu. B. [3 ]
Sidorov-Biryukov, D. D. [1 ]
Timofeev, V. I. [1 ,2 ]
Kuranova, I. P. [1 ,2 ]
机构
[1] Russian Acad Sci, Shubnikov Inst Crystallog, Fed Sci Res Ctr Crystallog & Photon, Moscow 119333, Russia
[2] Natl Res Ctr, Kurchatov Inst, Moscow 123098, Russia
[3] Moscow MV Lomonosov State Univ, Moscow 119991, Russia
关键词
D O I
10.1134/S1063774518010133
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
Bacterial imidazoleglycerol-phosphate dehydratase from Mycobacterium tuberculosis (HisB-Mt) is a convenient target for the discovery of selective inhibitors as potential antituberculosis drugs. The virtual screening was performed to find compounds suitable for the design of selective inhibitors of HisB-Mt. The positions of four ligands, which were selected based on the docking scoring function and docked to the activesite region of the enzyme, were refined by molecular dynamics simulation. The nearest environment of the ligands was determined. These compounds selectively bind to functionally essential active-site residues, thus blocking access of substrates to the active site of the enzyme, and can be used as lead compounds for the design of selective inhibitors of HisB-M.
引用
收藏
页码:74 / 78
页数:5
相关论文
共 50 条
  • [31] Discovery of New Inhibitors of Mycobacterium tuberculosis InhA Enzyme Using Virtual Screening and a 3D-Pharmacophore-Based Approach
    Pauli, Ivani
    dos Santos, Ricardo N.
    Rostirolla, Diana C.
    Martinelli, Leonardo K.
    Ducati, Rodrigo G.
    Timmers, Luis F. S. M.
    Basso, Luiz A.
    Santos, Diogenes S.
    Guido, Rafael V. C.
    Andricopulo, Adriano D.
    de Souza, Osmar Norberto
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2013, 53 (09) : 2390 - 2401
  • [32] Identification of Mycobacterium tuberculosis BioA inhibitors by using structure-based virtual screening
    Singh, Swati
    Khare, Garima
    Bahal, Ritika Kar
    Ghosh, Prahlad C.
    Tyagi, Anil K.
    DRUG DESIGN DEVELOPMENT AND THERAPY, 2018, 12 : 1065 - 1079
  • [33] Virtual screening studies to identify novel inhibitors for Sigma F protein of Mycobacterium tuberculosis
    Mustyala, Kiran Kumar
    Malkhed, Vasavi
    Chittireddy, Venkataramana Reddy
    Vuruputuri, Uma
    INTERNATIONAL JOURNAL OF MYCOBACTERIOLOGY, 2015, 4 (04) : 330 - 336
  • [34] Virtual Screening Identifies Novel and Potent Inhibitors of Mycobacterium tuberculosis PknB with Antibacterial Activity
    Thongdee, Paptawan
    Hanwarinroj, Chayanin
    Pakamwong, Bongkochawan
    Kamsri, Pharit
    Punkvang, Auradee
    Leanpolchareanchai, Jiraporn
    Ketrat, Sombat
    Saparpakorn, Patchreenart
    Hannongbua, Supa
    Ariyachaokun, Kanchiyaphat
    Suttisintong, Khomson
    Sureram, Sanya
    Kittakoop, Prasat
    Hongmanee, Poonpilas
    Santanirand, Pitak
    Mukamolova, Galina, V
    Blood, Rosemary A.
    Takebayashi, Yuiko
    Spencer, James
    Mulholland, Adrian J.
    Pungpo, Pornpan
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2022, 62 (24) : 6508 - 6518
  • [35] Identification of potential Mycobacterium tuberculosis beta-ketoacyl synthase inhibitors by virtual screening
    Miranda, T. F. N.
    Santos Junior, M. C.
    REVISTA VIRTUAL DE QUIMICA, 2016, 8 (05) : 1740 - 1756
  • [36] CRYSTALLIZATION AND ANALYSIS OF THE SUBUNIT ASSEMBLY AND QUATERNARY STRUCTURE OF IMIDAZOLEGLYCEROL PHOSPHATE DEHYDRATASE FROM SACCHAROMYCES-CEREVISIAE
    WILKINSON, KW
    BAKER, PJ
    RICE, DW
    RODGERS, HF
    STILLMAN, TJ
    HAWKES, T
    THOMAS, P
    EDWARDS, L
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1995, 51 : 845 - 847
  • [37] Identification of Potential Inhibitors of the Antigen 85C of Mycobacterium tuberculosis from Natural Resources by Virtual Screening
    Cerqueira, E. J.
    Santana, I. B.
    Silva, K. S.
    Santos Junior, M. C., Jr.
    REVISTA VIRTUAL DE QUIMICA, 2019, 11 (02) : 449 - 467
  • [38] Evaluation of the Mycobacterium smegmatis and BCG models for the discovery of Mycobacterium tuberculosis inhibitors
    Altaf, Mudassar
    Miller, Christopher H.
    Bellows, David S.
    O'Toole, Ronan
    TUBERCULOSIS, 2010, 90 (06) : 333 - 337
  • [39] Pharmacophore model-based virtual screening, docking, biological evaluation and molecular dynamics simulations for inhibitors discovery against α-tryptophan synthase from Mycobacterium tuberculosis
    Naz, Sadia
    Farooq, Umar
    Khan, Sara
    Sarwar, Rizwana
    Mabkhot, Yahia Nasser
    Saeed, Maria
    Alsayari, Abdulrahman
    Bin Muhsinah, Abdullatif
    Ul-Haq, Zaheer
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, 39 (02): : 610 - 620
  • [40] Discovery and Mechanistic Study of Mycobacterium tuberculosis PafA Inhibitors
    Li, Cong
    Liu, Song
    Dong, Baoyu
    Li, Chungen
    Jian, Lunan
    He, Juan
    Zeng, Jumei
    Zhou, Qiao
    Jia, Da
    Luo, Youfu
    Sun, Qingxiang
    JOURNAL OF MEDICINAL CHEMISTRY, 2022, 65 (16) : 11058 - 11065