Genetic diversity and population structure ofQuercus fabriHance in China revealed by genotyping-by-sequencing

被引：10
|
作者：
Xiong, Shifa [1 ,2 ]
Zhao, Yunxiao [1 ,2 ]
Chen, Yicun [1 ,2 ]
Gao, Ming [1 ,2 ]
Wu, Liwen [1 ,2 ]
Wang, Yangdong [1 ,2 ]
机构：
[1] Chinese Acad Forestry, State Key Lab Tree Genet & Breeding, Beijing, Peoples R China
[2] Chinese Acad Forestry, Res Inst Subtrop Forestry, Hangzhou, Peoples R China
来源：
ECOLOGY AND EVOLUTION | 2020年 / 10卷 / 16期
关键词：
China; genotyping-by-sequencing; genetic diversity; population structure; Quercus fabri; OAK; DIFFERENTIATION;
D O I：
10.1002/ece3.6598
中图分类号：
Q14 [生态学（生物生态学）];
学科分类号：
071012 ; 0713 ;
摘要：
Analysis of genetic diversity and population structure amongQuercus fabripopulations is essential for the conservation and utilization ofQ. fabriresources. Here, the genetic diversity and structure of 158 individuals from 13 natural populations ofQuercus fabriin China were analyzed using genotyping-by-sequencing (GBS). A total of 459,564 high-quality single nucleotide polymorphisms (SNPs) were obtained after filtration for subsequent analysis. Genetic structure analysis revealed that these individuals can be clustered into two groups and the structure can be explained mainly by the geographic barrier, showed gene introgression from coastal to inland areas and high mountains could significantly hinder the mutual introgression of genes. Genetic diversity analysis indicated that the individual differences within groups are greater than the differences between the two groups. These results will help us better understand the genetic backgrounds ofQ. fabri.
引用
收藏
页码：8949 / 8958
页数：10
相关论文
共 50 条
  • [21] Genetic diversity and population structure analysis of Forsythia ovata, a Korean endemic, based on genotyping-by-sequencing
    Lee, Yoo-Bin
    So, Soonku
    Park, Yoo-Jung
    Kang, Halam
    Lee, Ha-Rim
    Kim, Jae-Hyeong
    Gwak, Ho-Kwon
    Kim, Kyung-Ah
    Cheon, Kyeong-Sik
    PLOS ONE, 2025, 20 (02):
  • [22] Genetic Diversity and Population Structure of Asian and European Common Wheat Accessions Based on Genotyping-By-Sequencing
    Yang, Xiu
    Tan, Binwen
    Liu, Haijiao
    Zhu, Wei
    Xu, Lili
    Wang, Yi
    Fan, Xing
    Sha, Lina
    Zhang, Haiqin
    Zeng, Jian
    Wu, Dandan
    Jiang, Yunfeng
    Hu, Xigui
    Chen, Guoyue
    Zhou, Yonghong
    Kang, Houyang
    FRONTIERS IN GENETICS, 2020, 11
  • [23] Genetic Diversity and Population Structure Analysis of the USDA Olive Germplasm Using Genotyping-By-Sequencing (GBS)
    Islam, A. S. M. Faridul
    Sanders, Dean
    Mishra, Amit Kumar
    Joshi, Vijay
    GENES, 2021, 12 (12)
  • [24] Genotyping-by-Sequencing (GBS) Revealed Molecular Genetic Diversity of Iranian Wheat Landraces and Cultivars
    Alipour, Hadi
    Bihamta, Mohammad R.
    Mohammadi, Valiollah
    Peyghambari, Seyed A.
    Bai, Guihua
    Zhang, Guorong
    FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [25] Genetic Diversity of Northern Wheatgrass (Elymus lanceolatus ssp lanceolatus) as Revealed by Genotyping-by-Sequencing
    Li, Pingchuan
    Bhattarai, Surendra
    Peterson, Gregory W.
    Coulman, Bruce
    Schellenberg, Michael P.
    Biligetu, Bill
    Fu, Yong-Bi
    DIVERSITY-BASEL, 2018, 10 (02):
  • [26] Genetic Relationships and Population Structure of Pear Accessions from Anhui, China, Based on Genotyping-by-Sequencing
    Gao, Zhenghui
    Ma, Na
    Qi, Yongjie
    Kan, Liping
    Xu, Yiliu
    PLANT MOLECULAR BIOLOGY REPORTER, 2025, 43 (01) : 216 - 226
  • [27] Genetic diversity, population structure, and relationships in a collection of pepper (Capsicum spp.) landraces from the Spanish centre of diversity revealed by genotyping-by-sequencing (GBS)
    Pereira-Dias, Leandro
    Vilanova, Santiago
    Fita, Ana
    Prohens, Jaime
    Rodriguez-Burruezo, Adrian
    HORTICULTURE RESEARCH, 2019, 6
  • [28] Genetic Diversity and Population Structure Analysis of Barley Landraces from Shanghai Region Using Genotyping-by-Sequencing
    Li, Luli
    Halford, Nigel G.
    Wang, Huihui
    Zong, Yingjie
    Guo, Zhenzhu
    Lu, Ruiju
    Liu, Chenghong
    Chen, Zhiwei
    PHYTON-INTERNATIONAL JOURNAL OF EXPERIMENTAL BOTANY, 2023, 92 (04) : 1275 - 1287
  • [29] Genotyping-By-Sequencing Reveals Population Structure and Genetic Diversity of a Buffelgrass (Cenchrus ciliaris L.) Collection
    Negawo, Alemayehu Teressa
    Assefa, Yilikal
    Hanson, Jean
    Abdena, Asebe
    Muktar, Meki S.
    Habte, Ermias
    Sartie, Alieu M.
    Jones, Chris S.
    DIVERSITY-BASEL, 2020, 12 (03):
  • [30] Analysis of Genetic Diversity of Piedmont Azalea by Genotyping-by-sequencing
    Yadav, Lav Kumar
    Wilde, Dayton
    Hadizadeh, Hanieh
    HORTSCIENCE, 2018, 53 (09) : S307 - S307
12345