Molecular Logic Gates on DNA Origami Nanostructures for MicroRNA Diagnostics

被引:113
|
作者
Wang, Dongfang [1 ]
Fu, Yanming [1 ]
Yan, Juan [1 ,2 ]
Zhao, Bin [1 ]
Dai, Bin [1 ]
Chao, Jie [1 ]
Liu, Huajie [1 ]
He, Dannong [2 ]
Zhang, Yi [1 ]
Fan, Chunhai [1 ]
Song, Shiping [1 ]
机构
[1] Chinese Acad Sci, Shanghai Inst Appl Phys, Lab Phys Biol, Shanghai 201800, Peoples R China
[2] Natl Engn Res Ctr Nanotechnol, Shanghai 200241, Peoples R China
基金
美国国家科学基金会;
关键词
COMPUTATION; IDENTIFICATION; HEART;
D O I
10.1021/ac403661z
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Molecular computing holds great promise for I diagnosis and treatment of diseases at the molecular level; nevertheless, designing molecular logic gates to operate programmably and autonomously for molecular diagnostics still remains challenging. We designed logic gates on DNA Origami for microRNA analysis. As a demonstration, two indicators of heart failure, microRNA-21 and microRNA-195, were selected as the logic inputs. The logic gates contain two main modules: computation module and output module, performing in a single DNA Origami nanostructure. The computation module recognizes disease indicators, while the output module display different nanoscale symbols, "+" (positive) or "-" (negative), depending on the computing results. We demonstrated that the molecular logic gates worked well with single and two input combinations.
引用
收藏
页码:1932 / 1936
页数:5
相关论文
共 50 条
  • [1] Dynamically Arranging Gold Nanoparticles on DNA Origami for Molecular Logic Gates
    Yang, Jing
    Song, Zhichao
    Liu, Shi
    Zhang, Qiang
    Zhang, Cheng
    ACS APPLIED MATERIALS & INTERFACES, 2016, 8 (34) : 22451 - 22456
  • [2] Aptamer-Binding Directed DNA Origami Pattern for Logic Gates
    Yang, Jing
    Jiang, Shuoxing
    Liu, Xiangrong
    Pan, Linqiang
    Zhang, Cheng
    ACS APPLIED MATERIALS & INTERFACES, 2016, 8 (49) : 34054 - 34060
  • [3] Origami Logic Gates for Printable Robots
    Yan, Wenzhong
    Liu, Chang
    Mehta, Ankur
    2021 IEEE/RSJ INTERNATIONAL CONFERENCE ON INTELLIGENT ROBOTS AND SYSTEMS (IROS), 2021, : 6084 - 6089
  • [4] Molecular Threading and Tunable Molecular Recognition on DNA Origami Nanostructures
    Wu, Na
    Czajkowsky, Daniel M.
    Zhang, Jinjin
    Qu, Jianxun
    Ye, Ming
    Zeng, Dongdong
    Zhou, Xingfei
    Hu, Jun
    Shao, Zhifeng
    Li, Bin
    Fan, Chunhai
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (33) : 12172 - 12175
  • [5] DNA Logic Gates Integrated on DNA Substrates in Molecular Computing
    Bardales, Andrea C.
    Smirnov, Viktor
    Taylor, Katherine
    Kolpashchikov, Dmitry M.
    CHEMBIOCHEM, 2024, 25 (08)
  • [6] DNA Molecular Logic Gates based on DNAzyme Regulation
    Wu, Ranfeng
    Li, Yifan
    Yang, Jing
    2017 4TH INTERNATIONAL CONFERENCE ON INFORMATION SCIENCE AND CONTROL ENGINEERING (ICISCE), 2017, : 975 - 978
  • [7] Cryopreservation of DNA Origami Nanostructures
    Xin, Yang
    Kielar, Charlotte
    Zhu, Siqi
    Sikeler, Christoph
    Xu, Xiaodan
    Moeser, Christin
    Grundmeier, Guido
    Liedl, Tim
    Heuer-Jungemann, Amelie
    Smith, David M.
    Keller, Adrian
    SMALL, 2020, 16 (13)
  • [8] DNA logic gates
    Okamoto, A
    Tanaka, K
    Saito, I
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (30) : 9458 - 9463
  • [9] Stability of DNA Origami Nanostructures in Physiological Media: The Role of Molecular Interactions
    Linko, Veikko
    Keller, Adrian
    SMALL, 2023, 19 (34)
  • [10] DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
    Sakai, Yusuke
    Islam, Md. Sirajul
    Adamiak, Martyna
    Shiu, Simon Chi-Chin
    Tanner, Julian Alexander
    Heddle, Jonathan Gardiner
    GENES, 2018, 9 (12):