Sharing data and image processing tools in neuroimaging

被引:0
|
作者
Gibaud, B. [1 ]
Barillot, C. [1 ]
Benali, H. [2 ]
Dojat, M. [3 ]
Gaignard, A. [1 ]
Kinkingnehun, S. [2 ]
Matsumoto, J. -P. [4 ]
Pelegrini-Issac, M. [2 ]
Simon, E. [4 ]
Temal, L. [1 ]
机构
[1] Univ Rennes 1, CNRS, INRIA, INSERM,Unit Project VisAGeS U746, F-35014 Rennes, France
[2] CEA SHFJ, CHR La Pitie Salpetriere, IFR 49, Orsay, France
[3] Unite INSERM U594, Grenoble, France
[4] INRIA, Med SA, Rocquencourt, France
关键词
Data integration; Distributed image processing; Ontology; Neuroimaging; GRIDs;
D O I
暂无
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Research in neuroscience makes an extensive use of modern neuroimaging data The ability to share such data as well as processing tools to analyze them becomes a key factor of success of future research. This paper reports about works carried out in the context of the Neurobase project, a collaborative exploratory action supported by the French Ministry of Research. The partners have studied the design of a system suitable for sharing heterogeneous data and image processing tools, according to a federated approach, based on a common ontology. A demonstrator has been implemented, providing basic services for querying data and launching processing tools distributed at several sites.
引用
收藏
页码:41 / 42
页数:2
相关论文
共 50 条
  • [31] Special Issue "Advances in Neuroimaging Data Processing"
    Hramov, Alexander. E.
    Pisarchik, Alexander. N.
    [J]. APPLIED SCIENCES-BASEL, 2023, 13 (04):
  • [32] Sharing Models and Tools for Processing German Clinical Texts
    Hellrich, Johannes
    Matthies, Franz
    Faessler, Erik
    Hahn, Udo
    [J]. DIGITAL HEALTHCARE EMPOWERING EUROPEANS, 2015, 210 : 734 - 738
  • [33] Sharing brain mapping statistical results with the neuroimaging data model
    Maumet, Camille
    Auer, Tibor
    Bowring, Alexander
    Chen, Gang
    Das, Samir
    Flandin, Guillaume
    Ghosh, Satrajit
    Glatard, Tristan
    Gorgolewski, Krzysztof J.
    Helmer, Karl G.
    Jenkinson, Mark
    Keator, David B.
    Nichols, B. Nolan
    Poline, Jean-Baptiste
    Reynolds, Richard
    Sochat, Vanessa
    Turner, Jessica
    Nichols, Thomas E.
    [J]. SCIENTIFIC DATA, 2016, 3
  • [34] Sharing brain mapping statistical results with the neuroimaging data model
    Camille Maumet
    Tibor Auer
    Alexander Bowring
    Gang Chen
    Samir Das
    Guillaume Flandin
    Satrajit Ghosh
    Tristan Glatard
    Krzysztof J. Gorgolewski
    Karl G. Helmer
    Mark Jenkinson
    David B. Keator
    B. Nolan Nichols
    Jean-Baptiste Poline
    Richard Reynolds
    Vanessa Sochat
    Jessica Turner
    Thomas E. Nichols
    [J]. Scientific Data, 3
  • [35] Data management and sharing in neuroimaging: Practices and perceptions of MRI researchers
    Borghi, John A.
    Van Gulick, Ana E.
    [J]. PLOS ONE, 2018, 13 (07):
  • [36] Best practices in data analysis and sharing in neuroimaging using MRI
    Nichols, Thomas E.
    Das, Samir
    Eickhoff, Simon B.
    Evans, Alan C.
    Glatard, Tristan
    Hanke, Michael
    Kriegeskorte, Nikolaus
    Milham, Michael P.
    Poldrack, Russell A.
    Poline, Jean-Baptiste
    Proal, Erika
    Thirion, Bertrand
    Van Essen, David C.
    White, Tonya
    Yeo, B. T. Thomas
    [J]. NATURE NEUROSCIENCE, 2017, 20 (03) : 299 - 303
  • [37] Best practices in data analysis and sharing in neuroimaging using MRI
    Thomas E Nichols
    Samir Das
    Simon B Eickhoff
    Alan C Evans
    Tristan Glatard
    Michael Hanke
    Nikolaus Kriegeskorte
    Michael P Milham
    Russell A Poldrack
    Jean-Baptiste Poline
    Erika Proal
    Bertrand Thirion
    David C Van Essen
    Tonya White
    B T Thomas Yeo
    [J]. Nature Neuroscience, 2017, 20 : 299 - 303
  • [38] BrainLiner: Data sharing and manipulation tools for neuroscience
    Murata, Satoshi
    Takemiya, Makoto
    Kamitani, Yukiyasu
    [J]. NEUROSCIENCE RESEARCH, 2011, 71 : E408 - E408
  • [39] Post-publication sharing of data and tools
    Schofield, Paul N.
    Bubela, Tania
    Weaver, Thomas
    Brown, Stephen D.
    Hancock, John M.
    Einhorn, David
    Tocchini-Valentini, Glauco
    de Angelis, Martin Hrabe
    Rosenthal, Nadia
    [J]. NATURE, 2009, 461 (7261) : 171 - 173
  • [40] Post-publication sharing of data and tools
    Paul N. Schofield
    Tania Bubela
    Thomas Weaver
    Lili Portilla
    Stephen D. Brown
    John M. Hancock
    David Einhorn
    Glauco Tocchini-Valentini
    Martin Hrabe de Angelis
    Nadia Rosenthal
    [J]. Nature, 2009, 461 : 171 - 173