Complete chloroplast genome sequence and phylogenetic analysis ofSyzygium malaccense

被引:1
|
作者
Tao, Liang [1 ,2 ]
Shi, Zhuo-Gong [1 ]
Long, Qing-Yi [2 ]
机构
[1] Southwest Forestry Univ, Kunming, Yunnan, Peoples R China
[2] Yunnan Inst Trop Crops, Xishuangbanna, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词
Syzygium malaccense; chloroplast genome; phylogenetic analysis; APPLE SYZYGIUM-MALACCENSE;
D O I
10.1080/23802359.2020.1829132
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Syzygium malaccenseis native to Malaysia. It is sometimes called the malay apple, malay rose-apple, mountain rose-apple, mountain apple, water apple, or French cashew. The tree is very popular in many tropical and subtropical regions for its fruit and traditional medicine. The first complete chloroplast genome ofSyzygium malaccensehas been reported in this study. The complete chloroplast genome ofSyzygium malaccenseis 158,954 bp, composed of four regions: a large single-copy region with a size of 87,991 bp, a small single copy region with a size of 18,793 bp, and two inverted repeat regions with a size of 26,085 bp. The GC content is 36.97%. A total of 132 genes were annotated, including 84 encoding proteins, eight encoding rRNA genes, 37 encoding tRNA genes, and three encoding pseudo genes. Phylogenetic analysis showed thatSyzygium aromaticum,Syzygium cumini,andSyzygium forrestiiare closely related toSyzygium malaccense.
引用
下载
收藏
页码:3567 / 3568
页数:2
相关论文
共 50 条
  • [31] Complete chloroplast genome sequence and phylogenetic analysis of Chimonobambusa sichuanensis (Bambusoideae)
    Zhao, Wanqi
    Cao, Binbin
    Yang, Guangyao
    Zhang, Wengen
    Yu, Fen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 824 - 825
  • [32] THE COMPLETE CHLOROPLAST GENOME SEQUENCE OF ZINGIBER STRIOLATUM (ZINGIBERACEAE) AND A PHYLOGENETIC ANALYSIS
    Wang, Hui
    Idrees, Muhammad
    Song, Zhongping
    BANGLADESH JOURNAL OF PLANT TAXONOMY, 2024, 31 (01) : 173 - 176
  • [33] The complete chloroplast genome sequence of Olmediella betschleriana and its phylogenetic analysis
    Zhang, Zhiyang
    Wang, Deyan
    Li, Mengmeng
    Kang, Minghui
    Jiang, Yuanzhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 521 - 522
  • [34] The complete chloroplast genome sequence of chaya (Cnidoscolus aconitifolius) and phylogenetic analysis
    Qin, Yufeng
    Li, Mimi
    Zhong, Lianxiang
    Wei, Qiulan
    Xiao, Yufei
    Zhang, Xiaoning
    Qin, Zihai
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (01): : 269 - 270
  • [35] The Complete Chloroplast Genome Sequence of Machilus chuanchienensis (Lauraceae): Genome Structure and Phylogenetic Analysis
    Bai, Xue
    Peng, Juan
    Yang, Yongyi
    Xiong, Biao
    GENES, 2022, 13 (12)
  • [36] The complete chloroplast genome sequence of Artemisia stechmanniana (Asteraceae): genome structure and phylogenetic analysis
    Jiang, Dong-hang
    BIOLOGIA, 2024, 79 (03) : 715 - 728
  • [37] The complete chloroplast genome sequence of Artemisia stechmanniana (Asteraceae): genome structure and phylogenetic analysis
    Dong-hang Jiang
    Biologia, 2024, 79 : 715 - 728
  • [38] The complete chloroplast genome sequence of Lindera fragrans (Lauraceae): genome structure and phylogenetic analysis
    Bai, Xue
    Peng, Juan
    Xiong, Biao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1194 - 1195
  • [39] Complete chloroplast genome sequence of an endangered Ottelia cordata and its phylogenetic analysis
    Zhang, Qingfeng
    Shen, Zhixin
    Li, Fangyuan
    Li, Gaojun
    Shen, Jie
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2209 - 2210
  • [40] The complete chloroplast genome sequence of Dendrobium thyrsiflorum (Orchidaceae) and its phylogenetic analysis
    Zhu, Bin
    Luo, Xi
    Gao, Zuomin
    Feng, Qun
    Hu, Lijuan
    Weng, Qingbei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4085 - 4086