Genetic analysis of attachment glycoprotein (G) gene in new genotype ON1 of human respiratory syncytial virus detected in Japan

被引：39

作者：

Tsukagoshi, Hiroyuki ^{[1
]}

Yokoi, Hajime ^{[2
]}

Kobayashi, Miho ^{[1
]}

Kushibuchi, Izumi ^{[3
]}

Okamoto-Nakagawa, Reiko ^{[4
]}

Yoshida, Ayako ^{[5
]}

Morita, Yukio ^{[6
]}

Noda, Masahiro ^{[7
]}

Yamamoto, Norio ^{[8
]}

Sugai, Kazuko ^{[9
]}

Oishi, Kazunori ^{[7
]}

Kozawa, Kunihisa ^{[1
]}

Kuroda, Makoto ^{[10
]}

Shirabe, Komei ^{[4
]}

Kimura, Hirokazu ^{[7
]}

机构：

[1] Gunma Prefectural Inst Publ Hlth & Environm Sci, Maebashi, Gunma 3710052, Japan

[2] Chiba City Inst Hlth & Environm, Mihama Ku, Chiba 2610001, Japan

[3] Tochigi Prefectural Inst Publ Hlth, Utsunomiya, Tochigi 3291196, Japan

[4] Yamaguchi Prefectural Inst Publ Hlth & Environm, Yamaguchi 753082, Japan

[5] Aomori Prefectural Inst Publ Hlth & Environm, Aomori 0308566, Japan

[6] Tokyo Kasei Univ, Dept Nutr Sci, Itabashi Ku, Tokyo 1738602, Japan

[7] Natl Inst Infect Dis, Infect Dis Surveillance Ctr, Musashimurayama, Tokyo 2080011, Japan

[8] Natl Inst Infect Dis, Influenza Virus Res Ctr, Musashimurayama, Tokyo 2080011, Japan

[9] Natl Hosp Org Yokohama Med Ctr, Totsuka Ku, Yokohama, Kanagawa 2458575, Japan

[10] Natl Inst Infect Dis, Pathogen Genom Ctr, Musashimurayama, Tokyo 2080011, Japan

来源：

MICROBIOLOGY AND IMMUNOLOGY | 2013年 / 57卷 / 09期

基金：

日本学术振兴会;

关键词：

genotype ON1; human respiratory syncytial virus (RSV); phylogenetic analysis; G-PROTEIN; CHILDREN; DUPLICATION; SITES;

D O I：

10.1111/1348-0421.12075

中图分类号：

R392 [医学免疫学]; Q939.91 [免疫学];

学科分类号：

100102 ;

摘要：

We studied the evolution of the G gene in the new genotype ON1 of RSV detected from patients with acute respiratory infection in Japan. Phylogenetic analyses and the evolutionary timescale were obtained by the Bayesian MCMC method. We also analyzed p-distance and positive selection sites. A new genotype ON1 emerged around 2001. The evolution rate was rapid (3.57x10(-3) substitutions/site per year). The p-distance was short and no positive selection site was found in the present strains. These results suggested that a new genotype ON1 of RSV-A emerged approximately10 years ago and spread to some countries with a high evolution rate.

引用

页码：655 / 659

页数：5

共 50 条

[21] Genetic diversity and evolutionary insights of respiratory syncytial virus A ON1 genotype: global and local transmission dynamics
Duvvuri, Venkata R.
Granados, Andrea
Rosenfeld, Paul
Bahl, Justin
Eshaghi, Alireza
Gubbay, Jonathan B.
SCIENTIFIC REPORTS, 2015, 5
[22] Molecular characterization of human respiratory syncytial virus, 2010-2011: identification of genotype ON1 and a new subgroup B genotype in Thailand
Vichtavat Auksornkitti
Nichaphat Kamprasert
Siwanat Thongkomplew
Kamol Suwannakarn
Apiradee Theamboonlers
Rujipat Samransamruajkij
Yong Poovorawan
Archives of Virology, 2014, 159 : 499 - 507
[23] DEMONSTRATION THAT GLYCOPROTEIN-G IS THE ATTACHMENT PROTEIN OF RESPIRATORY SYNCYTIAL VIRUS
LEVINE, S
KLAIBERFRANCO, R
PARADISO, PR
JOURNAL OF GENERAL VIROLOGY, 1987, 68 : 2521 - 2524
[24] Enhanced neutralization of human respiratory syncytial virus by mixtures of monoclonal antibodies to the attachment (G) glycoprotein
Martínez, I
Melero, JA
JOURNAL OF GENERAL VIROLOGY, 1998, 79 : 2215 - 2220
[25] Identification of a linear heparin binding domain for human respiratory syncytial virus attachment glycoprotein G
Feldman, SA
Hendry, RM
Beeler, JA
JOURNAL OF VIROLOGY, 1999, 73 (08) : 6610 - 6617
[26] Evolutionary analysis of the ON1 genotype of subtype a respiratory syncytial virus in Riyadh during 2008-16
Al-Hassinah, Sarah
Parveen, Shama
Somily, Ali M.
AlSaadi, Muslim Mohammed
Alamery, Salman Fareeh
Haq, Samina Haider
Alsenaidy, Hytham A.
Ahmed, Anwar
INFECTION GENETICS AND EVOLUTION, 2020, 79
[27] Molecular Evolution of Attachment Glycoprotein (G) and Fusion Protein (F) Genes of Respiratory Syncytial Virus ON1 and BA9 Strains in Xiamen, China
Sun, Yong-Peng
Lei, Si-Yu
Wang, Ying-Bin
Wang, Yi-Zhen
Qiang, Hong-Sheng
Yin, Yi-Fan
Jiang, Ze-Min
Zhu, Min
Chen, Xiao-Li
Ye, Hui-Ming
Zheng, Zi-Zheng
Xia, Ning-Shao
MICROBIOLOGY SPECTRUM, 2022, 10 (02):
[28] Respiratory syncytial virus -: G gene genotype and disease severity
Struck, A
Forster, J
Ihorst, G
Werchau, H
König, W
König, B
PEDIATRIC INFECTIOUS DISEASE JOURNAL, 2004, 23 (11) : 1000 - 1002
[29] Genetic and antigenic analyses of bovine respiratory syncytial virus detected in Japan
Yaegashi, G
Seimiya, YM
Seki, Y
Tsunemitsu, H
JOURNAL OF VETERINARY MEDICAL SCIENCE, 2005, 67 (02): : 145 - 150
[30] CHARACTERIZING THE GENOMIC DIVERSITY, EVOLUTION AND PHYLOGEOGRAPHY OF RESPIRATORY SYNCYTIAL VIRUS GENOTYPE ON1 IN KENYA
Otieno, James Richard
Kamau, Everlyn M.
Oketch, John W.
Ngoi, Joyce M.
Gichuki, Alexander M.
Binter, Spela
Otieno, Grieven P.
Ngama, Mwanajuma
Agoti, Charles N.
Cane, Patricia A.
Kellam, Paul
Cotten, Matthew
Lemey, Philippe
Nokes, D. J.
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2019, 101 : 68 - 69

← 1 2 3 4 5 →