MULTI TISSUE MODELLING OF DIFFUSION MRI SIGNAL REVEALS VOLUME FRACTION BIAS

被引:0
|
作者
Frigo, Matteo [1 ]
Fick, Rutger H. J. [2 ]
Zucchelli, Mauro [1 ]
Deslauriers-Gauthier, Samuel [1 ]
Deriche, Rachid [1 ]
机构
[1] Univ Cote DAzur, Inria Sophia Antipolis Mediterranee, Athena Team, Nice, France
[2] Therapanacea, Paris, France
基金
欧洲研究理事会;
关键词
Diffusion MRI; White Matter; Microstructure; Generalized Multi Tissue Modelling; DENSITY;
D O I
10.1109/isbi45749.2020.9098649
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
This paper highlights a systematic bias in white matter tissue microstructure modelling via diffusion MRI that is due to the common, yet inaccurate, assumption that all brain tissues have a similar T-2 response. We show that the concept of "signal fraction" is more appropriate to describe what have always been referred to as "volume fraction". This dichotomy is described from the theoretical point of view by analysing the mathematical formulation of the diffusion MRI signal. We propose a generalized multi tissue modelling framework that allows to compute the actual volume fractions. The Dmipy implementation of this framework is then used to verify the presence of this bias in two classical tissue microstructure models computed on two subjects from the Human Connectome Project database. The proposed paradigm shift exposes the research field of brain tissue microstructure estimation to the necessity of a systematic review of the results obtained in the past that takes into account the difference between the concepts of volume fraction and signal fraction.
引用
收藏
页码:991 / 994
页数:4
相关论文
共 50 条
  • [41] Diffusion-weighted PROPELLER MRI for quantitative assessment of liver tumor necrotic fraction and viable tumor volume in VX2 rabbits
    Deng, Jie
    Virmani, Sumeet
    Young, Joseph
    Harris, Kathleen
    Yang, Guang-Yu
    Rademaker, Alfred
    Woloschak, Gayle
    Omary, Reed A.
    Larson, Andrew C.
    JOURNAL OF MAGNETIC RESONANCE IMAGING, 2008, 27 (05) : 1069 - 1076
  • [42] Fourier Tract Sampling (FouTS): A framework for improved inference of white matter tracts from diffusion MRI by explicitly modelling tract volume
    Close, Thomas G.
    Tournier, Jacques-Donald
    Johnston, Leigh A.
    Calamante, Fernando
    Mareels, Iven
    Connelly, Alan
    NEUROIMAGE, 2015, 120 : 412 - 427
  • [43] Improved EM-based tissue segmentation and partial volume effect quantification in multi-sequence brain MRI
    Dugas-Phocion, G
    Ballester, MAG
    Malandain, G
    Lebrun, C
    Ayache, N
    MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2004, PT 1, PROCEEDINGS, 2004, 3216 : 26 - 33
  • [44] Working Memory And Brain Tissue Microstructure: White Matter Tract Integrity Based On Multi-Shell Diffusion MRI
    Sohae Chung
    Els Fieremans
    Nuri E. Kucukboyaci
    Xiuyuan Wang
    Charles J. Morton
    Dmitry S. Novikov
    Joseph F. Rath
    Yvonne W. Lui
    Scientific Reports, 8
  • [45] Working Memory And Brain Tissue Microstructure: White Matter Tract Integrity Based On Multi-Shell Diffusion MRI
    Chung, Sohae
    Fieremans, Els
    Kucukboyaci, Nuri E.
    Wang, Xiuyuan
    Morton, Charles J.
    Novikov, Dmitry S.
    Rath, Joseph F.
    Lui, Yvonne W.
    SCIENTIFIC REPORTS, 2018, 8
  • [46] A DEEP LEARNING FRAMEWORK FOR ESTIMATING MULTI-FIBER PICASO MODEL PARAMETERS OF TISSUE MICROSTRUCTURE USING DIFFUSION MRI
    Xue, Tengfei
    Karimi, Hazhar Sufi
    Consagra, William
    Zhang, Fan
    Cai, Weidong
    O'Donnell, Lauren J.
    Ning, Lipeng
    Rathi, Yogesh
    2023 IEEE 20TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, ISBI, 2023,
  • [47] Multi-Tissue Decomposition of Diffusion MRI Signals via l0 Sparse-Group Estimation
    Yap, Pew-Thian
    Zhang, Yong
    Shen, Dinggang
    IEEE TRANSACTIONS ON IMAGE PROCESSING, 2016, 25 (09) : 4340 - 4353
  • [48] Evaluation of diffusion weighted imaging in the context of multi-parametric MRI of the prostate in the assessment of suspected low volume prostatic carcinoma
    Papadopoulos, Ioannis
    Phillips, Jonathan
    Evans, Rhodri
    Fenn, Neil
    Shermer, Sophie
    MAGNETIC RESONANCE IMAGING, 2018, 47 : 131 - 136
  • [49] Single-sided NMR for the diagnosis of osteoporosis: Diffusion weighted pulse sequences for the estimation of trabecular bone volume fraction in the presence of muscle tissue
    Barbieri, M.
    Brizi, L.
    Bortolotti, V.
    Fantazzini, P.
    d'Eurydice, M. Nogueira
    Obruchkov, S.
    Liu, H.
    Galvosas, P.
    MICROPOROUS AND MESOPOROUS MATERIALS, 2018, 269 : 166 - 170
  • [50] Connectome analysis with diffusion MRI in idiopathic Parkinson's disease: Evaluation using multi-shell, multi-tissue, constrained spherical deconvolution
    Kamagata, Koji
    Zalesky, Andrew
    Hatano, Taku
    Di Biase, Maria Angelique
    El Samad, Omar
    Saiki, Shinji
    Shimoji, Keigo
    Kumamaru, Kanako K.
    Kamiya, Kouhei
    Hori, Masaaki
    Hattori, Nobutaka
    Aoki, Shigeki
    Pantelis, Christos
    NEUROIMAGE-CLINICAL, 2018, 17 : 518 - 529