Profiling oncogenic extra-chromosomal DNA in cancer

被引:0
|
作者
Hung, King L. [1 ]
Chang, Howard Y. [1 ]
机构
[1] Stanford Univ, Stanford, CA 94305 USA
关键词
D O I
10.1038/s41588-022-01193-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Cancer cells frequently amplify oncogenes on DNA molecules outside of chromosomes - extrachromosomal DNA. A technique adapted for isolation of extrachromosomal DNA, termed CRISPR-CATCH, enables analyses of its genetic and epigenetic compositions, which provides insights into its origin, structural diversity and mechanism of oncogene activation in cancer.
引用
收藏
页码:1591 / 1592
页数:2
相关论文
共 50 条
  • [41] Quantification of Cre-mediated recombination by a novel strategy reveals a stable extra-chromosomal deletion-circle in mice
    Leonhard, Wouter N.
    Roelfsema, Jeroen H.
    Leeuwen, Irma S. Lantinga-van
    Breuning, Martijn H.
    Peters, Dorien J. M.
    BMC BIOTECHNOLOGY, 2008, 8 (1)
  • [42] Bacterial artificial chromosomes establish replication timing and sub-nuclear compartment de novo as extra-chromosomal vectors
    Sima, Jiao
    Bartlett, Daniel A.
    Gordon, Molly R.
    Gilbert, David M.
    NUCLEIC ACIDS RESEARCH, 2018, 46 (04) : 1810 - 1820
  • [43] SECRETION OF THE HEPATITIS-B VIRUS SURFACE-ANTIGEN FROM MOUSE CELLS USING AN EXTRA-CHROMOSOMAL EUKARYOTIC VECTOR
    STENLUND, A
    LAMY, D
    MORENOLOPEZ, J
    AHOLA, H
    PETTERSSON, U
    TIOLLAIS, P
    EMBO JOURNAL, 1983, 2 (05): : 669 - 673
  • [44] CLONING AND COMPLETE NUCLEOTIDE-SEQUENCE ANALYSIS OF EXTRA-CHROMOSOMAL HEPATITIS-B VIRUS (HBV) VARIANT DNA FROM THE LIVER OF A PATIENT SEROLOGICALLY IMMUNE TO HBV INFECTION
    BLUM, HE
    LIANG, TJ
    WANDS, JR
    HEPATOLOGY, 1989, 10 (04) : 641 - 641
  • [45] CHROMOSOMAL ANOMOLIES FOLLOWING EFFECT OF ONCOGENIC DNA VIRUS ON ANIMAL CELLS
    PRUNIERAS, M
    DELESCLUSE, C
    NOUVELLE REVUE FRANCAISE D HEMATOLOGIE, 1970, 10 (01): : 162 - +
  • [46] DNA replication timing directly regulates the frequency of oncogenic chromosomal translocations
    Peycheva, Mihaela
    Neumann, Tobias
    Malzl, Daniel
    Nazarova, Mariia
    Schoeberl, Ursula E.
    Pavri, Rushad
    SCIENCE, 2022, 377 (6612) : 1277 - +
  • [47] Oncogenic extrachromosomal DNA functions as mobile enhancers to globally amplify chromosomal transcription
    Zhu, Yanfen
    Gujar, Amit D.
    Wong, Chee-Hong
    Tjong, Harianto
    Ngan, Chew Yee
    Gong, Liang
    Chen, Yi-An
    Kim, Hoon
    Liu, Jihe
    Li, Meihong
    Mil-Homens, Adam
    Maurya, Rahul
    Kuhlberg, Chris
    Sun, Fanyue
    Yi, Eunhee
    DeCarvalho, Ana C.
    Ruan, Yijun
    Verhaak, Roel G. W.
    Wei, Chia-Lin
    CANCER CELL, 2021, 39 (05) : 694 - +
  • [48] Detection of oncogenic DNA viruses in colorectal cancer
    Giuliani, Laura
    Ronci, Corrado
    Bonifacio, Daniela
    Di Bonito, Luigi
    Favalli, Cartesio
    Perno, Carlo Federico
    Syrjanen, Kari
    Ciotti, Marco
    ANTICANCER RESEARCH, 2008, 28 (2B) : 1405 - 1410
  • [49] Causes of oncogenic chromosomal translocation
    Aplan, PD
    TRENDS IN GENETICS, 2006, 22 (01) : 46 - 55
  • [50] DNA methylation profiling in cancer
    Kondo, Yutaka
    Issa, Jean-Pierre J.
    EXPERT REVIEWS IN MOLECULAR MEDICINE, 2010, 12