Olivibacter jilunii sp nov., isolated from DDT-contaminated soil

被引:10
|
作者
Chen, Kai [1 ]
Tang, Shu-Kun [2 ,3 ]
Wang, Guang-Li [1 ,4 ]
Nie, Guo-Xing [5 ]
Li, Qin-Fen [6 ]
Zhang, Ji-Dong [7 ]
Li, Wen-Jun [2 ,3 ]
Li, Shun-Peng [1 ]
机构
[1] Nanjing Agr Univ, Minist Agr, Key Lab Microbiol Engn Agr Environm, Nanjing 210095, Peoples R China
[2] Yunnan Univ, Yunnan Inst Microbiol, Minist Educ, Key Lab Microbial Resources, Kunming 650091, Peoples R China
[3] Yunnan Univ, Yunnan Inst Microbiol, Lab Conservat & Utilizat Bioresources, Kunming 650091, Peoples R China
[4] Huaibei Normal Univ, Coll Life Sci, Huaibei 235000, Peoples R China
[5] Henan Normal Univ, Coll Life Sci, Xinxiang 453002, Peoples R China
[6] Chinese Acad Trop Agr Sci, Environm & Plant Protect Inst, Haikou 571101, Peoples R China
[7] NJAU Bioengn Environm Co Ltd, Nanjing 210095, Jiangsu, Peoples R China
关键词
DEOXYRIBONUCLEIC-ACID; CORYNEFORM BACTERIA; CLASSIFICATION; IDENTIFICATION; MENAQUINONES;
D O I
10.1099/ijs.0.042416-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Bacterial strain 14-2A(T), isolated from a long-term DDT-contaminated soil in China, was characterized by using a polyphasic approach to clarify its taxonomic position. Strain 14-2A(T) was found to be Gram-negative, aerobic, non-spore-forming, non-motile, non-flagellated and rod-shaped. The new isolate was able to grow at 4-42 degrees C, pH 6.0-9.0 and with 0-5 % NaCl. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate belongs to the family Sphingobacteriaceae. The 16S rRNA gene sequence of strain 14-2A(T) showed the highest similarity with Olivibacter oleidegradans TBF2/20.2(T) (99.4%), followed by Pseudosphingobacterium domesticum DC-186(T) (93.8 %), Olivibacter ginsengisoli Gsoil 060(T) (93.6%), Olivibacter terrae Jip13(T) (93.1 %), Olivibacter soli Gsoil 034(T) (92.8%) and Olivibacter sitiensis AW-6(T) (89.6%). The DNA-DNA hybridization value between strains 14-2A(T) and O. oleidegradans TBF2/20.2(T) was 34.45 +/- 2.11 %. Strain 14-2A(T) contained phosphatidylethanolamine, phosphatidylmonomethylethanolamine, aminophospholipid and phosphatidylinositol mannoside as the major polar lipids. The DNA G+C content was 41.2 mol%. MK-7 is the major isoprenoid quinone. Summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c) iso-C-15:0 and iso-C-17:0 3-OH are the major fatty acids. The phenotypic and chemotaxonomic data confirmed the affiliation of strain 14-2A(T) to the genus Olivibacter. On the basis of the phylogenetic and phenotypic characteristics, and chemotaxonomic data, strain 14-2A(T) is considered to represent a novel species of the genus Olivibacter, for which the name Olivibacter jilunii sp. nov. is proposed; the type strain is 14-2A(T) (=KCTC 23098(T)=CCTCC AB 2010105(T)).
引用
收藏
页码:1083 / 1088
页数:6
相关论文
共 50 条
  • [31] Sphingopyxis nepalensis sp nov., isolated from oil-contaminated soil
    Chaudhary, Dhiraj Kumar
    Kim, Jaisoo
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (01) : 364 - 370
  • [32] Alishewanella solinquinati sp nov., Isolated from Soil Contaminated with Textile Dyes
    Kolekar, Yogesh M.
    Pawar, Shrikant P.
    Adav, Sunil S.
    Zheng, Liu-Qiang
    Li, Wen-Jun
    Shouche, Yogesh S.
    Dastager, Syed G.
    Kodam, Kisan M.
    CURRENT MICROBIOLOGY, 2013, 67 (04) : 454 - 459
  • [33] Pontibacter ummariensis sp nov., isolated from a hexachlorocyclohexane-contaminated soil
    Mahato, N. K.
    Tripathi, C.
    Nayyar, N.
    Singh, A. K.
    Lal, R.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 1080 - 1087
  • [34] Pseudoxanthobacter liyangensis sp nov., isolated from dichlorodiphenyltrichloroethane-contaminated soil
    Liu, Xiao-Mei
    Chen, Kai
    Meng, Chao
    Zhang, Long
    Zhu, Jian-Chun
    Huang, Xing
    Li, Shun-Peng
    Jiang, Jian-Dong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 3390 - 3394
  • [35] Azospirillum rugosum sp nov., isolated from oil-contaminated soil
    Young, C. C.
    Hupfer, H.
    Siering, C.
    Ho, M. -J.
    Arun, A. B.
    Lai, W. -A.
    Rekha, P. D.
    Shen, F. -T.
    Hung, M. -H.
    Chen, W. -M.
    Yassin, A. F.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 : 959 - 963
  • [36] Geodermatophilus daqingensis sp nov., isolated from petroleum-contaminated soil
    Wang, Yang
    Zhang, Liguo
    Zhang, Xiaofei
    Huang, Jinying
    Zhao, Yu
    Zhao, Yuanling
    Liu, Jianxin
    Huang, Cui
    Wang, Jing
    Hu, Yingying
    Ren, Guoling
    Xu, Xiuhong
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2017, 110 (06): : 803 - 809
  • [37] Luteimonas tolerans sp nov., isolated from hexachlorocyclohexane-contaminated soil
    Rani, Pooja
    Mukherjee, Udita
    Verma, Helianthous
    Kamra, Komal
    Lal, Rup
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 1851 - 1856
  • [38] Clostridium chromiireducens sp nov., isolated from Cr(VI)-contaminated soil
    Inglett, K. S.
    Bae, H. S.
    Aldrich, H. C.
    Hatfield, K.
    Ogram, A. V.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 2626 - 2631
  • [39] Flavobacterium lindanitolerans sp nov., isolated from hexachlorocyclohexane-contaminated soil
    Jit, Simran
    Dadhwal, Mandeep
    Prakash, Om
    Lal, Rup
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 : 1665 - 1669
  • [40] Roseomonas nepalensis sp nov., isolated from oil-contaminated soil
    Chaudhary, Dhiraj Kumar
    Kim, Jaisoo
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (04) : 981 - 987