Isolation of novel microsatellites from Jatropha curcas L. and their cross-species amplification

被引:15
|
作者
Pamidimarri, D. V. N. Sudheer [1 ]
Sinha, Ramini [1 ]
Kothari, Pragya [1 ]
Reddy, Muppala P. [1 ]
机构
[1] CSIR, Cent Salt & Marine Chem Res Inst, Discipline Wasteland Res, Bhavnagar 364002, Gujarat, India
关键词
biodiesel; cross-species amplification; FIASCO (fast isolation by AFLP of sequences containing repeats); Jatropha curcas; microsatellites;
D O I
10.1111/j.1755-0998.2008.02471.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Jatropha curcas L., a member of the Euphorbiaceae, is widely distributed in different parts of the globe. In the present study, 12 microsatellites were isolated from J. curcas and their cross-species amplification was checked in six species of genus Jatropha. Within J. curcas, observed and expected heterozygosities ranged from 0.94 to 0.54 and from 0.95 to 0.56, respectively. Of the 12 loci, five showed significant deviation from Hardy-Weinberg equilibrium. There was no significant linkage disequilibrium detected between any of the loci. The markers isolated in the present investigation will be useful for assessing the population diversity and genetic structure of J. curcas and also in other species of Jatropha.
引用
收藏
页码:431 / 433
页数:3
相关论文
共 50 条
  • [21] Investigation on Cross-Compatibility Barriers in the Biofuel Crop Jatropha curcas L. with Wild Jatropha Species
    Kumar, R. Senthil
    Parthiban, K. T.
    Hemalatha, P.
    Kalaiselvi, T.
    Rao, M. Govinda
    CROP SCIENCE, 2009, 49 (05) : 1667 - 1674
  • [22] Cross-species amplification of microsatellites in crocodilians: assessment and applications for the future
    Miles, Lee G.
    Lance, Stacey L.
    Isberg, Sally R.
    Moran, Chris
    Glenn, Travis C.
    CONSERVATION GENETICS, 2009, 10 (04) : 935 - 954
  • [23] Characterisation and cross-species transferability of microsatellites in the common fig (Ficus carica L.)
    Giraldo, E
    Viruel, MA
    López-Corrales, M
    Hormaza, JI
    JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY, 2005, 80 (02): : 217 - 224
  • [24] Cross-species amplification and development of microsatellites for six species of European Coenagrionid damselflies
    Johansson, Helena
    Ingvarsson, Par K.
    Johansson, Frank
    CONSERVATION GENETICS RESOURCES, 2012, 4 (01) : 191 - 196
  • [25] Cross-species amplification and development of microsatellites for six species of European Coenagrionid damselflies
    Helena Johansson
    Pär K. Ingvarsson
    Frank Johansson
    Conservation Genetics Resources, 2012, 4 : 191 - 196
  • [26] Micropropagation of Jatropha curcas L.
    Sarathum, S.
    Hegele, M.
    Wuensche, J. N.
    XXVIII INTERNATIONAL HORTICULTURAL CONGRESS ON SCIENCE AND HORTICULTURE FOR PEOPLE (IHC2010): INTERNATIONAL SYMPOSIUM ON MICRO AND MACRO TECHNOLOGIES FOR PLANT PROPAGATION AND BREEDING IN HORTICULTURE, 2011, 923 : 65 - 71
  • [27] Isolation and characterization of microsatellites in Chinese white olive (Canarium album) and cross-species amplification in Canarium pimela
    Zhang, Xin
    Ye, Wan-Hui
    Cao, Hong-Lin
    Wang, Zheng-Feng
    Shen, Hao
    Lian, Ju-Yu
    CONSERVATION GENETICS, 2009, 10 (06) : 1833 - 1835
  • [28] Isolation and characterization of microsatellites in Leuciscus cephalus (Cypriniformes, Cyprinidae) and cross-species amplification within the family Cyprinidae
    Vyskocilova, Martina
    Simkova, Andrea
    Martin, Jean-Francois
    MOLECULAR ECOLOGY NOTES, 2007, 7 (06): : 1150 - 1154
  • [29] Isolation and characterization of microsatellites in Neogobius kessleri (Perciformes, Gobiidae) and cross-species amplification within the family Gobiidae
    Vyskocilova, Martina
    Ondrackova, Marketa
    Simkova, Andrea
    Martin, Jean-Francois
    MOLECULAR ECOLOGY NOTES, 2007, 7 (04): : 701 - 704
  • [30] Isolation and characterization of microsatellites in Chinese white olive (Canarium album) and cross-species amplification in Canarium pimela
    Xin Zhang
    Wan-Hui Ye
    Hong-Lin Cao
    Zheng-Feng Wang
    Hao Shen
    Ju-Yu Lian
    Conservation Genetics, 2009, 10 : 1833 - 1835