A collaborative multiyear, multimodel assessment of seasonal influenza forecasting in the United States

被引:140
|
作者
Reich, Nicholas G. [1 ]
Brooks, Logan C. [2 ]
Fox, Spencer J. [3 ]
Kandula, Sasikiran [4 ]
McGowan, Craig J. [5 ]
Moore, Evan [1 ]
Osthus, Dave [6 ]
Ray, Evan L. [7 ]
Tushar, Abhinav [1 ]
Yamana, Teresa K. [4 ]
Biggerstaff, Matthew [5 ]
Johansson, Michael A. [8 ]
Rosenfeld, Roni [9 ]
Shaman, Jeffrey [4 ]
机构
[1] Univ Massachusetts, Dept Biostat & Epidemiol, Amherst, MA 01003 USA
[2] Carnegie Mellon Univ, Comp Sci Dept, Pittsburgh, PA 15213 USA
[3] Univ Texas Austin, Dept Integrat Biol, Austin, TX 78712 USA
[4] Columbia Univ, Dept Environm Hlth Sci, New York, NY 10032 USA
[5] Ctr Dis Control & Prevent, Influenza Div, Atlanta, GA 30333 USA
[6] Los Alamos Natl Lab, Stat Sci Grp, Los Alamos, NM 87545 USA
[7] Mt Holyoke Coll, Dept Math & Stat, S Hadley, MA 01075 USA
[8] Ctr Dis Control & Prevent, Div Vector Borne Dis, San Juan, PR 00920 USA
[9] Carnegie Mellon Univ, Machine Learning Dept, Pittsburgh, PA 15213 USA
关键词
influenza; forecasting; statistics; infectious disease; public health; DISEASE; TRANSMISSION; PREDICTION;
D O I
10.1073/pnas.1812594116
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Influenza infects an estimated 9-35 million individuals each year in the United States and is a contributing cause for between 12,000 and 56,000 deaths annually. Seasonal outbreaks of influenza are common in temperate regions of the world, with highest incidence typically occurring in colder and drier months of the year. Real-time forecasts of influenza transmission can inform public health response to outbreaks. We present the results of a multiinstitution collaborative effort to standardize the collection and evaluation of forecasting models for influenza in the United States for the 2010/2011 through 2016/2017 influenza seasons. For these seven seasons, we assembled weekly real-time forecasts of seven targets of public health interest from 22 different models. We compared forecast accuracy of each model relative to a historical baseline seasonal average. Across all regions of the United States, over half of the models showed consistently better performance than the historical baseline when forecasting incidence of influenza-like illness 1 wk, 2 wk, and 3 wk ahead of available data and when forecasting the timing and magnitude of the seasonal peak. In some regions, delays in data reporting were strongly and negatively associated with forecast accuracy. More timely reporting and an improved overall accessibility to novel and traditional data sources are needed to improve forecasting accuracy and its integration with real-time public health decision making.
引用
收藏
页码:3146 / 3154
页数:9
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