anyFish: an open-source software to generate animated fish models for behavioural studies

被引:0
|
作者
Veen, Thor [1 ]
Ingley, Spencer J. [2 ]
Cui, Rongfeng [3 ]
Simpson, Jon [4 ]
Asl, Mohammad Rahmani [4 ]
Zhang, Ji [5 ]
Butkowski, Trisha [4 ]
Li, Wen [5 ]
Hash, Chelsea [6 ]
Johnson, Jerald B. [2 ]
Yan, Wei [4 ]
Rosenthal, Gil G. [3 ]
机构
[1] Univ British Columbia, Biodivers Res Ctr, Vancouver, BC V6T 1Z4, Canada
[2] Brigham Young Univ, Dept Biol, Evolutionary Ecol Labs, Provo, UT 84602 USA
[3] Texas A&M Univ, Dept Biol, College Stn, TX 77843 USA
[4] Texas A&M Univ, Coll Architecture, College Stn, TX 77843 USA
[5] Texas A&M Univ, Dept Comp Sci, College Stn, TX 77843 USA
[6] Lively Disposit, Cohoes, NY USA
基金
加拿大自然科学与工程研究理事会; 美国国家科学基金会;
关键词
communication; computer animation; Gasterosteus; playback; stickleback; visual signals; STICKLEBACKS GASTEROSTEUS-ACULEATUS; FEMALE PREFERENCE; SEXUAL SELECTION; 3-SPINED STICKLEBACKS; VIDEO PLAYBACK; BODY-SIZE; COLOR POLYMORPHISM; MATE PREFERENCES; EJACULATE SIZE; EVOLUTION;
D O I
暂无
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Problem: Using an experimental approach to study behaviours based on visual signals is severely limited due to the difficulty of combining realistic models (e.g. live fish) with the manipulation of signals in isolation. Solution: Computer animations allow the manipulation of a single cue while maintaining the rest of the behavioural phenotype of a realistic three-dimensional (3D) model. Software: We introduce the open-source software anyFish for the creation of 3D-animated fish. Both the animated model and its behaviour can be modified by the end-user to suit specific needs. Applications: Computer-animated fish facilitate the identification of factors influencing behaviours based on visual cues, and ultimately the way they both drive and respond to selection. For our research, we vary nuptial colour and size and shape of animated male stickleback to quantify female choice for these characters. The software has many other applications, as other fish species can be animated and characters like swimming speed and direction can be manipulated as well.
引用
下载
收藏
页码:361 / 375
页数:15
相关论文
共 50 条
  • [31] goGPS: open-source MATLAB software
    Antonio M. Herrera
    Hendy F. Suhandri
    Eugenio Realini
    Mirko Reguzzoni
    M. Clara de Lacy
    GPS Solutions, 2016, 20 : 595 - 603
  • [32] Open-source software: not quite endsville
    Stahl, MT
    DRUG DISCOVERY TODAY, 2005, 10 (03) : 219 - 222
  • [33] Greenstone: Open-source DL software
    Witten, IH
    Bainbridge, D
    Boddie, S
    COMMUNICATIONS OF THE ACM, 2001, 44 (05) : 47 - 47
  • [34] Open-source software for SEM metrology
    Mochi, Iacopo
    Vockenhuber, Michaela
    Allenet, Timothee
    Ekinci, Yasin
    PHOTOMASK TECHNOLOGY 2020, 2020, 11518
  • [35] Open-source software for geospatial analysis
    Isamar M. Cortés
    Nature Reviews Earth & Environment, 2023, 4 : 143 - 143
  • [36] Who Chooses Open-Source Software?
    Lemley, Mark A.
    Shafir, Ziv
    UNIVERSITY OF CHICAGO LAW REVIEW, 2011, 78 (01): : 139 - 164
  • [38] Characterizing Commits in Open-Source Software
    Ferreira, Mivian M.
    Goncalves, Diego Santos
    Bigonha, Mariza A. S.
    Ferreira, Kecia A. M.
    PROCEEDINGS OF THE 21TH BRAZILIAN SYMPOSIUM ON SOFTWARE QUALITY, SBOS 2022, 2022,
  • [39] Open-source software for geospatial analysis
    Cortes, Isamar M.
    NATURE REVIEWS EARTH & ENVIRONMENT, 2023, 4 (03) : 143 - 143
  • [40] Legal implications of open-source software
    McGowan, D
    UNIVERSITY OF ILLINOIS LAW REVIEW, 2001, (01): : 241 - 304