Larynx cancer survival model developed through open-source federated learning

被引:14
|
作者
Hansen, Christian Ronn [1 ,2 ,3 ,4 ]
Price, Gareth [5 ]
Field, Matthew [6 ]
Sarup, Nis [1 ]
Zukauskaite, Ruta [2 ,7 ]
Johansen, Jorgen [7 ,8 ]
Eriksen, Jesper Grau [7 ,9 ]
Aly, Farhannah [6 ,10 ,11 ]
McPartlin, Andrew [5 ]
Holloway, Lois [4 ,6 ,10 ,11 ]
Thwaites, David [4 ]
Brink, Carsten [1 ,2 ]
机构
[1] Odense Univ Hosp, Lab Radiat Phys, Odense, Denmark
[2] Univ Southern Denmark, Dept Clin Res, Odense, Denmark
[3] Aarhus Univ Hosp, Danish Ctr Particle Therapy, Aarhus, Denmark
[4] Univ Sydney, Inst Med Phys, Sch Phys, Sydney, Australia
[5] Christie NHS Fdn Trust, Radiotherapy Dept, Manchester, England
[6] Ingham Inst Appl Med Res, Sydney, Australia
[7] Odense Univ Hosp, Dept Oncol, Odense, Denmark
[8] Aarhus Univ Hosp, Dept Expt Clin Oncol, Aarhus, Denmark
[9] Aarhus Univ Hosp, Dept Oncol, Aarhus, Denmark
[10] Univ New South Wales, Southwest Sydney Clin Campus, Sydney, Australia
[11] Liverpool & Macarthur Canc Therapy Ctr, Sydney, Australia
关键词
Distributed learning; Federated learning; Larynx cancer; Stratified Cox model; Data leakage; Cox survival model; SQUAMOUS-CELL CARCINOMA; PREDICT LOCAL-CONTROL; TUMOR VOLUME; ADVANCED HEAD; NECK; RADIOTHERAPY;
D O I
10.1016/j.radonc.2022.09.023
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Introduction: Federated learning has the potential to perfrom analysis on decentralised data; however, there are some obstacles to survival analyses as there is a risk of data leakage. This study demonstrates how to perform a stratified Cox regression survival analysis specifically designed to avoid data leakage using federated learning on larynx cancer patients from centres in three different countries. Methods: Data were obtained from 1821 larynx cancer patients treated with radiotherapy in three cen-tres. Tumour volume was available for all 786 of the included patients. Parameter selection among eleven clinical and radiotherapy parameters were performed using best subset selection and cross-validation through the federated learning system, AusCAT. After parameter selection, b regression coefficients were estimated using bootstrap. Calibration plots were generated at 2 and 5-years survival, and inner and outer risk groups' Kaplan-Meier curves were compared to the Cox model prediction. Results: The best performing Cox model included log(GTV), performance status, age, smoking, haemoglo-bin and N-classification; however, the simplest model with similar statistical prediction power included log(GTV) and performance status only. The Harrell C-indices for the simplest model were for Odense, Christie and Liverpool 0.75[0.71-0.78], 0.65[0.59-0.71], and 0.69[0.59-0.77], respectively. The values are slightly higher for the full model with C-index 0.77[0.74-0.80], 0.67[0.62-0.73] and 0.71[0.61- 0.80], respectively. Smoking during treatment has the same hazard as a ten-years older nonsmoking patient. Conclusion: Without any patient-specific data leaving the hospitals, a stratified Cox regression model based on data from centres in three countries was developed without data leakage risks. The overall sur-vival model is primarily driven by tumour volume and performance status. (c) 2022 The Authors. Published by Elsevier B.V. Radiotherapy and Oncology 176 (2022) 179-186 This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
引用
收藏
页码:179 / 186
页数:8
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