Shannon Entropy Analysis of the Genome Code

被引：23

作者：

Tenreiro Machado, J. A. ^{[1
]}

机构：

[1] Inst Engn Polytech Porto, Dept Elect Engn, P-4200072 Oporto, Portugal

来源：

MATHEMATICAL PROBLEMS IN ENGINEERING | 2012年 / 2012卷

关键词：

DNA; REPRESENTATION; COMPLEXITY;

D O I：

10.1155/2012/132625

中图分类号：

T [工业技术];

学科分类号：

08 ;

摘要：

This paper studies the chromosome information of twenty five species, namely, mammals, fishes, birds, insects, nematodes, fungus, and one plant. A quantifying scheme inspired in the state space representation of dynamical systems is formulated. Based on this algorithm, the information of each chromosome is converted into a bidimensional distribution. The plots are then analyzed and characterized by means of Shannon entropy. The large volume of information is integrated by averaging the lengths and entropy quantities of each species. The results can be easily visualized revealing quantitative global genomic information.

引用

页数：12

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