Complete genome sequence of two isolates of pokeweed mosaic virus and its relationship to other members of the genus Potyvirus

被引：5
|
作者：
Xu, Donglin [1 ]
Wang, Mingqiang [1 ]
Kinard, Gary [1 ]
Li, Ruhui [1 ]
机构：
[1] ARS, Natl Germplasm Resources Lab, USDA, Beltsville, MD 20705 USA
来源：
ARCHIVES OF VIROLOGY | 2012年 / 157卷 / 10期
关键词：
FAMILY; PRIMER;
D O I：
10.1007/s00705-012-1329-4
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The complete genomic sequences of two isolates of pokeweed mosaic virus (PkMV) were determined to be 9512 nucleotides long, excluding the poly(A) tail. Their genomic organization is typical of potyviruses and contains conserved motifs found in members of the genus Potyvirus. Pairwise comparisons showed that PkMV and other members of the genus Potyvirus share 51.0-57.5 % sequence identity at the genome sequence level and 39.8-53.0 % at the polyprotein sequence level. Phylogenetic analysis indicated that PkMV is most closely related to several viruses in the PVY group of the genus Potyvirus. The genomic information obtained for PkMV suggests that this virus is a distinct potyvirus.
引用
收藏
页码：2023 / 2026
页数：4
相关论文
共 50 条
  • [41] Identification of the genome-linked protein in virions of Potato virus A, with comparison to other members in genus Potyvirus
    Oruetxebarria, I
    Guo, DY
    Merits, A
    Mäkinen, K
    Saarma, M
    Valkonen, JPT
    VIRUS RESEARCH, 2001, 73 (02) : 103 - 112
  • [42] The complete genome sequence of pepper severe mosaic virus and comparison with other potyviruses
    H. I. Ahn
    J. Y. Yoon
    J. S. Hong
    H. I. Yoon
    M. J. Kim
    J. H. Ha
    M. J. Rhie
    J. K. Choi
    W. M. Park
    K. H. Ryu
    Archives of Virology, 2006, 151 : 2037 - 2045
  • [43] The Genome of Hawaii Virus and its Relationship with other Members of the caliciviridae
    Maria A. Pletneva
    Stanislav V. Sosnovtsev
    Kim Y. Green
    Virus Genes, 2001, 23 : 5 - 16
  • [44] The genome of Hawaii virus and its relationship with other members of the Caliciviridae
    Pletneva, MA
    Sosnovtsev, SV
    Green, KY
    VIRUS GENES, 2001, 23 (01) : 5 - 16
  • [45] Nucleotide sequence and genome organisation of cherry mottle leaf virus and its relationship to members of the Trichovirus genus
    James, D
    Jelkmann, W
    Upton, C
    ARCHIVES OF VIROLOGY, 2000, 145 (05) : 995 - 1007
  • [46] Nucleotide sequence and genome organisation of cherry mottle leaf virus and its relationship to members of the Trichovirus genus
    D. James
    W. Jelkmann
    C. Upton
    Archives of Virology, 2000, 145 : 995 - 1007
  • [47] Complete genome sequence of Habenaria mosaic virus, a new potyvirus infecting a terrestrial orchid (Habenaria radiata) in Japan
    Hideki Kondo
    Takanori Maeda
    I Wayan Gara
    Sotaro Chiba
    Kazuyuki Maruyama
    Tetsuo Tamada
    Nobuhiro Suzuki
    Archives of Virology, 2014, 159 : 163 - 166
  • [48] Whole genome characterization of wisteria vein mosaic virus from Iran and its relationship to other members of bean common mosaic virus group
    Mohanad S. Al-Jaberi
    Zohreh Moradi
    Mohsen Mehrvar
    Hayder R. Al-Inizi
    Mohammad Zakiaghl
    3 Biotech, 2021, 11
  • [49] Whole genome characterization of wisteria vein mosaic virus from Iran and its relationship to other members of bean common mosaic virus group
    Al-Jaberi, Mohanad S.
    Moradi, Zohreh
    Mehrvar, Mohsen
    Al-Inizi, Hayder R.
    Zakiaghl, Mohammad
    3 BIOTECH, 2021, 11 (09)
  • [50] Complete coding sequence and infectious clone of pokeweed mosaic virus Arkansas isolate
    Alexander Klenov
    Katalin A. Hudak
    European Journal of Plant Pathology, 2018, 152 : 541 - 547
12345