High-Resolution 3D Structure Determination of Kaliotoxin by Solid-State NMR Spectroscopy

被引:25
|
作者
Korukottu, Jegannath [1 ]
Schneider, Robert [1 ]
Vijayan, Vinesh [1 ]
Lange, Adam [1 ]
Pongs, Olaf [2 ]
Becker, Stefan [1 ]
Baldus, Marc [1 ]
Zweckstetter, Markus [1 ]
机构
[1] Max Planck Inst Biophys Chem, Dept NMR Based Struct Biol, Gottingen, Germany
[2] Inst Neurale Signalverarbeitung, Zentrum Mol Neurobiol, Hamburg, Germany
来源
PLOS ONE | 2008年 / 3卷 / 06期
关键词
D O I
10.1371/journal.pone.0002359
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
High-resolution solid-state NMR spectroscopy can provide structural information of proteins that cannot be studied by X-ray crystallography or solution NMR spectroscopy. Here we demonstrate that it is possible to determine a protein structure by solid-state NMR to a resolution comparable to that by solution NMR. Using an iterative assignment and structure calculation protocol, a large number of distance restraints was extracted from H-1/H-1 mixing experiments recorded on a single uniformly labeled sample under magic angle spinning conditions. The calculated structure has a coordinate precision of 0.6 angstrom and 1.3 angstrom for the backbone and side chain heavy atoms, respectively, and deviates from the structure observed in solution. The approach is expected to be applicable to larger systems enabling the determination of high-resolution structures of amyloid or membrane proteins.
引用
下载
收藏
页数:7
相关论文
共 50 条
  • [21] High-resolution 14N solid-state NMR spectroscopy
    Jeschke, G
    Jansen, M
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 1998, 37 (09) : 1282 - 1283
  • [22] HIGH-RESOLUTION HETERONUCLEAR DIPOLAR SOLID-STATE NMR-SPECTROSCOPY
    WU, CH
    RAMAMOORTHY, A
    OPELLA, SJ
    JOURNAL OF MAGNETIC RESONANCE SERIES A, 1994, 109 (02) : 270 - 272
  • [23] HIGH-RESOLUTION SOLID-STATE NMR OF GLASSES
    STEGER, TR
    SCHAEFER, J
    STEJSKAL, EO
    MCKAY, RA
    SEFCIK, MD
    ANNALS OF THE NEW YORK ACADEMY OF SCIENCES, 1981, 371 (OCT) : 106 - 122
  • [24] HIGH-RESOLUTION SOLID-STATE NMR OF PROTEINS
    SMITH, SO
    GRIFFIN, RG
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 1988, 39 : 511 - 535
  • [25] Studying molecular 3D structure and dynamics by high-resolution solid-state NMR: Application to l-tyrosine-ethylester
    Seidel, K
    Etzkorn, M
    Sonnenberg, L
    Griesinger, C
    Sebald, A
    Baldus, M
    JOURNAL OF PHYSICAL CHEMISTRY A, 2005, 109 (11): : 2436 - 2442
  • [26] High-resolution solid-state NMR studies of gas vesicle structure
    Bayro, Marvin J.
    Sivertsen, Astrid
    Belenky, Marina
    Griffin, Robert G.
    Herzfeld, Judith
    BIOPHYSICAL JOURNAL, 2007, : 564A - 564A
  • [27] High-Resolution Solid-State NMR Structure of a 17.6 kDa Protein
    Bertini, Ivano
    Bhaumik, Anusarka
    De Paepe, Gael
    Griffin, Robert G.
    Lelli, Moreno
    Lewandowski, Jozef R.
    Luchinat, Claudio
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (03) : 1032 - 1040
  • [28] APPLICATION OF HIGH-RESOLUTION SOLID-STATE NMR-SPECTROSCOPY FOR THE DETERMINATION OF THE RING-CHAIN TAUTOMERISM
    KESSLER, H
    OSCHKINAT, H
    ZIMMERMANN, G
    MOHRLE, H
    BIEGHOLDT, M
    ARZ, W
    FORSTER, H
    CHEMISCHE BERICHTE-RECUEIL, 1984, 117 (02): : 702 - 709
  • [29] HIGH-RESOLUTION SOLID-STATE C-13-NMR SPECTROSCOPY OF POLYMERS
    VOELKEL, R
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION IN ENGLISH, 1988, 27 (11): : 1468 - 1483
  • [30] Dynamics and crystalline diversity of enkephalins by high-resolution solid-state NMR spectroscopy
    Naito, A
    Kamihira, M
    Nishimura, K
    Tuzi, S
    Saito, H
    PEPTIDE CHEMISTRY 1995, 1996, : 445 - 448