Identification of an Immune Signature Predicting Prognosis Risk and Lymphocyte Infiltration in Colon Cancer

被引:73
|
作者
Li, Xinyu [1 ,2 ]
Wen, Dacheng [3 ]
Li, Xiaokang [4 ]
Yao, Chunli [2 ,5 ]
Chong, Wei [6 ,7 ,8 ]
Chen, Hao [9 ]
机构
[1] Shandong First Med Univ & Shandong Acad Med Sci, Shandong Canc Hosp & Inst, Dept Gastrointestinal Oncol, Jinan, Peoples R China
[2] Ludwig Maximilian Univ Munich, Dept Gen Visceral & Transplant Surg, Univ Hosp, Munich, Germany
[3] Jilin Univ, Dept Gastrointestinal Nutr & Hernia Surg, Hosp 2, Changchun, Peoples R China
[4] Shandong Univ, Cheelo Coll Med, Dept Dermatol, Jinan Cent Hosp, Jinan, Peoples R China
[5] Jilin Univ, Hosp 2, Dept Dermatol, Changchun, Peoples R China
[6] Shandong First Med Univ, Shandong Prov Hosp, Dept Gastrointestinal Surg, Jinan, Peoples R China
[7] Shandong Univ, Cheeloo Coll Med, Shandong Prov Hosp, Dept Gastrointestinal Surg, Jinan, Peoples R China
[8] Shandong Prov Hosp, Key Lab Engn Shandong Prov, Jinan, Peoples R China
[9] Shandong Univ, Qilu Hosp, Clin Epidemiol Unit, Clin Res Ctr, Jinan, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2020年 / 11卷
关键词
colon cancer; immune signature; tumor mutation load; immune infiltration; significantly mutated genes; COLORECTAL-CANCER; TUMORS; BLOCKADE; IMMUNOTHERAPY;
D O I
10.3389/fimmu.2020.01678
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Increasing studies have highlighted the effects of the tumor immune micro-environment (TIM) on colon cancer (CC) tumorigenesis, prognosis, and metastasis. However, there is no reliable molecular marker that can effectively estimate the immune infiltration and predict the CC relapse risk. Here, we leveraged the gene expression profile and clinical characteristics from 1430 samples, including four gene expression omnibus database (GEO) databases and the cancer genome atlas (TCGA) database, to construct an immune risk signature that could be used as a predictor of survival outcome and immune activity. A risk model consisting of 10 immune-related genes were screened out in the Lasso-Cox model and were then aggregated to generate the immune risk signature based on the regression coefficients. The signature demonstrated robust prognostic ability in discovery and validation datasets, and this association remained significant in the multivariate analysis after controlling for age, gender, clinical stage, or microsatellite instability status. Leukocyte subpopulation analysis indicated that the low-risk signature was enriched with cytotoxic cells (activated CD4/CD8(+)T cell and NK cell) and depleted of myeloid-derived suppressor cells (MDSC) and regulatory T cells. Further analysis indicated patients with a low-risk signature harbored higher tumor mutation loads and lower mutational frequencies in significantly mutated genes ofAPCandFBXW7. Together, our constructed signature could predict prognosis and represent the TIM of CC, which promotes individualized treatment and provides a promising novel molecular marker for immunotherapy.
引用
收藏
页数:13
相关论文
共 50 条
  • [21] Identification of necroptosis-related genes for predicting prognosis and exploring immune infiltration landscape in colon adenocarcinoma
    Wang, Ye
    Lin, Ming-gui
    Meng, Lei
    Chen, Zhang-ming
    Wei, Zhi-jian
    Ying, Song-cheng
    Xu, Aman
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [22] Extracellular matrix-based gene signature for predicting prognosis in colon cancer and immune microenvironment
    Chai, Ruoyang
    Su, Zhengjia
    Zhao, Yajie
    Liang, Wei
    TRANSLATIONAL CANCER RESEARCH, 2023, 12 (02) : 321 - +
  • [23] Identification and validation of an immune-relevant risk signature predicting survival outcome and immune infiltration in uveal melanoma
    Sun, Xiao
    Li, Qingmin
    Xu, Guijun
    INTERNATIONAL OPHTHALMOLOGY, 2023, 43 (12) : 4689 - 4700
  • [24] Identification of a Hypoxia-Related Signature for Predicting Prognosis and the Immune Microenvironment in Bladder Cancer
    Jiang, Minxiao
    Ren, Liangliang
    Chen, Yuanlei
    Wang, Huan
    Wu, Haiyang
    Cheng, Sheng
    Li, Gonghui
    Yu, Shicheng
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [25] Identification and validation of an immune-relevant risk signature predicting survival outcome and immune infiltration in uveal melanoma
    Xiao Sun
    Qingmin Li
    Guijun Xu
    International Ophthalmology, 2023, 43 : 4689 - 4700
  • [26] A novel necroptosis-associated miRNA signature predicting prognosis of endometrial cancer and correlated with immune infiltration
    Ye, Zhongxue
    Jiang, Yafen
    Wu, Junlong
    TAIWANESE JOURNAL OF OBSTETRICS & GYNECOLOGY, 2023, 62 (02): : 291 - 298
  • [27] Development of a metabolism-related signature for predicting prognosis, immune infiltration and immunotherapy response in breast cancer
    Li, Chunzhen
    Tao, Yijie
    Chen, Yining
    Wu, Yunyang
    He, Yixian
    Yin, Shulei
    Xu, Sheng
    Yu, Yizhi
    AMERICAN JOURNAL OF CANCER RESEARCH, 2022, 12 (12): : 5440 - +
  • [28] Construction of a ferroptosis-related eight gene signature for predicting the prognosis and immune infiltration of thyroid cancer
    Ren, Xiaoying
    Du, Huijun
    Cheng, Weilun
    Wang, Yujing
    Xu, Yuanxin
    Yan, Shuang
    Gao, Yunan
    FRONTIERS IN ENDOCRINOLOGY, 2022, 13
  • [29] Construction of a circadian rhythm-related gene signature for predicting the prognosis and immune infiltration of breast cancer
    Ni, Lin
    Li, He
    Cui, Yanqi
    Xiong, Wanqiu
    Chen, Shuming
    Huang, Hancong
    Wang, Zhiwei
    Zhao, Hu
    Wang, Bing
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2025, 12
  • [30] A novel necroptosis-related miRNA signature for predicting the prognosis of esophageal cancer and immune infiltration analysis
    Zhang, Miao
    Song, Shaoran
    Wang, Bo
    Shang, Yangyang
    Liu, Peijun
    Li, Juan
    TRANSLATIONAL CANCER RESEARCH, 2025, 14 (02)