Identification of an Immune Signature Predicting Prognosis Risk and Lymphocyte Infiltration in Colon Cancer

被引:73
|
作者
Li, Xinyu [1 ,2 ]
Wen, Dacheng [3 ]
Li, Xiaokang [4 ]
Yao, Chunli [2 ,5 ]
Chong, Wei [6 ,7 ,8 ]
Chen, Hao [9 ]
机构
[1] Shandong First Med Univ & Shandong Acad Med Sci, Shandong Canc Hosp & Inst, Dept Gastrointestinal Oncol, Jinan, Peoples R China
[2] Ludwig Maximilian Univ Munich, Dept Gen Visceral & Transplant Surg, Univ Hosp, Munich, Germany
[3] Jilin Univ, Dept Gastrointestinal Nutr & Hernia Surg, Hosp 2, Changchun, Peoples R China
[4] Shandong Univ, Cheelo Coll Med, Dept Dermatol, Jinan Cent Hosp, Jinan, Peoples R China
[5] Jilin Univ, Hosp 2, Dept Dermatol, Changchun, Peoples R China
[6] Shandong First Med Univ, Shandong Prov Hosp, Dept Gastrointestinal Surg, Jinan, Peoples R China
[7] Shandong Univ, Cheeloo Coll Med, Shandong Prov Hosp, Dept Gastrointestinal Surg, Jinan, Peoples R China
[8] Shandong Prov Hosp, Key Lab Engn Shandong Prov, Jinan, Peoples R China
[9] Shandong Univ, Qilu Hosp, Clin Epidemiol Unit, Clin Res Ctr, Jinan, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2020年 / 11卷
关键词
colon cancer; immune signature; tumor mutation load; immune infiltration; significantly mutated genes; COLORECTAL-CANCER; TUMORS; BLOCKADE; IMMUNOTHERAPY;
D O I
10.3389/fimmu.2020.01678
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Increasing studies have highlighted the effects of the tumor immune micro-environment (TIM) on colon cancer (CC) tumorigenesis, prognosis, and metastasis. However, there is no reliable molecular marker that can effectively estimate the immune infiltration and predict the CC relapse risk. Here, we leveraged the gene expression profile and clinical characteristics from 1430 samples, including four gene expression omnibus database (GEO) databases and the cancer genome atlas (TCGA) database, to construct an immune risk signature that could be used as a predictor of survival outcome and immune activity. A risk model consisting of 10 immune-related genes were screened out in the Lasso-Cox model and were then aggregated to generate the immune risk signature based on the regression coefficients. The signature demonstrated robust prognostic ability in discovery and validation datasets, and this association remained significant in the multivariate analysis after controlling for age, gender, clinical stage, or microsatellite instability status. Leukocyte subpopulation analysis indicated that the low-risk signature was enriched with cytotoxic cells (activated CD4/CD8(+)T cell and NK cell) and depleted of myeloid-derived suppressor cells (MDSC) and regulatory T cells. Further analysis indicated patients with a low-risk signature harbored higher tumor mutation loads and lower mutational frequencies in significantly mutated genes ofAPCandFBXW7. Together, our constructed signature could predict prognosis and represent the TIM of CC, which promotes individualized treatment and provides a promising novel molecular marker for immunotherapy.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Identification of a Novel Immune Landscape Signature for Predicting Prognosis and Response of Colon Cancer to Immunotherapy
    Wang, Zheng
    Song, Jingru
    Azami, Nisma Lena Bahaji
    Sun, Mingyu
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [2] Identification of a combined apoptosis and hypoxia gene signature for predicting prognosis and immune infiltration in breast cancer
    Ren, Xueting
    Cui, Hanxiao
    Wu, Jianhua
    Zhou, Ruina
    Wang, Nan
    Liu, Dandan
    Xie, Xin
    Zhang, Hao
    Liu, Di
    Ma, Xiaobin
    Dang, Chengxue
    Kang, Huafeng
    Lin, Shuai
    CANCER MEDICINE, 2022, 11 (20): : 3886 - 3901
  • [3] Identification of an Metabolic Related Risk Signature Predicts Prognosis in Cervical Cancer and Correlates With Immune Infiltration
    Shang, Chunliang
    Huang, Jiaming
    Guo, Hongyan
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [4] Construction of a Signature Composed of 14 Immune Genes to Judge the Prognosis and Immune Infiltration of Colon Cancer
    Mo, Shaocong
    Pei, Zhenle
    Dai, Leijie
    GENETIC TESTING AND MOLECULAR BIOMARKERS, 2021, 25 (03) : 163 - 178
  • [5] Identification of an immune signature predicting prognosis risk of patients in lung adenocarcinoma
    Song, Qian
    Shang, Jun
    Yang, Zuyi
    Zhang, Lanlin
    Zhang, Chufan
    Chen, Jianing
    Wu, Xianghua
    JOURNAL OF TRANSLATIONAL MEDICINE, 2019, 17 (1)
  • [6] Identification of an immune signature predicting prognosis risk of patients in lung adenocarcinoma
    Qian Song
    Jun Shang
    Zuyi Yang
    Lanlin Zhang
    Chufan Zhang
    Jianing Chen
    Xianghua Wu
    Journal of Translational Medicine, 17
  • [7] Identification of immune cell infiltration landscape for predicting prognosis of colorectal cancer
    Wu, Xueqian
    Li, Jianxia
    Zhang, Yuanzhe
    Cheng, Yi
    Wu, Zehua
    Zhan, Weixiang
    Deng, Yanhong
    GASTROENTEROLOGY REPORT, 2023, 11
  • [8] A pyroptosis-related gene signature that predicts immune infiltration and prognosis in colon cancer
    Wu, Mingjian
    Hao, Shuai
    Wang, Xiaoxiang
    Su, Shuguang
    Du, Siyuan
    Zhou, Sitong
    Yang, Ronghua
    Du, Hanpeng
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [9] A Novel Pyroptosis-Related Gene Signature for Predicting the Prognosis and the Associated Immune Infiltration in Colon Adenocarcinoma
    Chen, Zhiyuan
    Han, Zheng
    Nan, Han
    Fan, Jianing
    Zhan, Jingfei
    Zhang, Yu
    Zhu, He
    Cao, Yu
    Shen, Xian
    Xue, Xiangyang
    Lin, Kezhi
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [10] Identification of a basement membrane-related gene signature for predicting prognosis, immune infiltration, and drug sensitivity in colorectal cancer
    Xiang, Shengxiao
    Sun, Xinxin
    Zhu, Yunxiang
    Tang, Zhijie
    Tang, Xiaofei
    FRONTIERS IN ONCOLOGY, 2024, 14