Genetic Diversity among Wild Resources of the Genus Boehmeria Jacq. from West China Determined Using Inter-simple Sequence Repeat and Rapid Amplification of Polymorphic DNA Markers

被引:10
|
作者
Liu, Li-jun [1 ]
Meng, Zu-Qing [2 ]
Wang, Bo [1 ]
Wang, Xu-xia [1 ]
Yang, Jin-Yu [1 ]
Peng, Ding-xiang [1 ]
机构
[1] Huazhong Agr Univ, Coll Plant Sci & Technol, Wuhan 430070, Peoples R China
[2] Tibel Agr & Anim Husb Coll, Linzhi 860000, Peoples R China
关键词
Boehmeria; ISSR marker; RAPD marker; Taxonomic analysis; UPGMA; ISSR; IDENTIFICATION; CULTIVARS; RFLP; AFLP;
D O I
10.1626/pps.12.88
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Ramie (Boehmeria nivea L.Gaud) is planted as an important fiber crop hi OWL Randomly amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) markers were used for the first time for die detection of genetic polymorphism of 37 ramie accessions (29 wild genotypes and 8 commercial varieties) collected front various geographical regions of West China. The objectives of 06 study were: 1) to examine the genetic diversity, of four specks in genus Boehmeria Jacq.: B. clidemioides var diffusa, B. nivea L. Gaud B. longispica Steud, and B. macrophylla Hornem; and 2) to determine the genetic distance of the four species by these Methods. Laportea cuspidata (Wedd.) Friis was used as an outgroup species. The results showed that 375 (17 monomorphic fragments) strips were amplified by 31 RAPD primers while 266 00 monomorphic fragments) strips by 18 ISSR primers. On the average, each RAN) and ISSR primer amplified 12.1 and 14.8 strips, respectively. Based on the appearance of the marker, the genetic relationships were analyzed using unweighted pair-group method (A arithmetic average cluster analysis (UPGMA) and We genetic Dice coefficients were calculated. Clustering analysis indicated that the 37 accessions were classified into four clusters which belong to 3 sections (including Section Phyllostachys, Section Tilocnide and section Duretia). The overall grouping pattern of clustering Corresponded well with traditional botanical taxonomy. Principal component. analysis PCA) confirmed the patterns of genetic diversity observed among the species. These results suggested that RAN) and ISSR were efficient approaches suitable for taxonomic analysis of ramie wild materials. The results provided valid guidelines for collection, conservation , and characterisation of Boehmeria genetic resources.
引用
收藏
页码:88 / 96
页数:9
相关论文
共 50 条
  • [21] Genetic diversity estimated using inter-simple sequence repeat markers in commercial crops of cupuassu tree
    da Silva, Bruna Mezzalira
    Bandini Rossi, Ana Aparecida
    Encinas Dardengo, Juliana de Freitas
    Amado Correa de Araujo, Vitor Arreguy
    Rossi, Fernanda Saragosa
    de Oliveira, Luiz Orlando
    Clarindo, Wellington Ronildo
    CIENCIA RURAL, 2016, 46 (01): : 108 - 113
  • [22] Analysis of genetic diversity in Arrhenatherum elatius Germplasm using inter-simple sequence repeat (ISSR) markers
    Meng, Lin
    Yang, Hong Xin
    Mao, Pei Chun
    Gao, Hong Wen
    Sun, Fu Ding
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (38): : 7342 - 7348
  • [23] Genetic Diversity of Persian Walnut from Iran as Revealed by Inter-Simple Sequence Repeat (ISSR) Markers
    Mahmoodi, Rana
    Rahman, Fatemeh
    Paktarmani, Razieh
    JOURNAL OF THE AMERICAN POMOLOGICAL SOCIETY, 2012, 66 (02) : 101 - 106
  • [24] Estimation of genetic diversity in some Iranian wild Prunus subgenus Cerasus accessions using inter-simple sequence repeat (ISSR) markers
    Shahi-Gharahlar, Ali
    Zamani, Zabihollah
    Fatahi, Reza
    Bouzari, Naser
    BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2011, 39 (4-6) : 826 - 833
  • [25] Analysis of genetic diversity of Piper spp. in Hainan Island (China) using inter-simple sequence repeat ISSR markers
    Jiang, Yan
    Liu, Jin-Ping
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (66): : 14731 - 14737
  • [26] Assessment of genetic diversity in Ziziphus jujube Mill. Cultivars derived from northern China using inter-simple sequence repeat markers
    Shen, Jie
    Sun, Zhaoxia
    Hou, Siyu
    Liu, Ronghua
    Wang, Yuguo
    Guo, Pingyi
    CROP SCIENCE, 2020, 60 (01) : 320 - 329
  • [27] Genetic diversity of the annual weed Monochoria vaginalis in southern China detected by random amplified polymorphic DNA and inter-simple sequence repeat analyses
    Li, WG
    Shen, JJ
    Wang, JB
    WEED RESEARCH, 2005, 45 (06) : 424 - 430
  • [28] Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity
    Zhang, Xiao-Gang
    Han, Ting
    He, Zhi-Gao
    Zhang, Qiao-Yan
    Zhang, Lei
    Rahman, Khalid
    Qin, Lu-Ping
    JOURNAL OF NATURAL MEDICINES, 2012, 66 (01) : 241 - 247
  • [29] Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity
    Xiao-Gang Zhang
    Ting Han
    Zhi-Gao He
    Qiao-Yan Zhang
    Lei Zhang
    Khalid Rahman
    Lu-Ping Qin
    Journal of Natural Medicines, 2012, 66 : 241 - 247
  • [30] Analysis of the Genetic Diversity of Natural Populations of Alpinia oxyphylla Miquel Using Inter-Simple Sequence Repeat Markers
    Wang, Haiyan
    Liu, Xiaojing
    Wen, Mingfu
    Pan, Kun
    Zou, Meiling
    Lu, Cheng
    Liu, Shisheng
    Wang, Wenquan
    CROP SCIENCE, 2012, 52 (04) : 1767 - 1775